myRT

myRT report for GCA_013371605.1_ASM1337160v1

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Seq: JABXEW010000014.1 Streptococcus suis strain ZJJX0908008 contig14, whole genome shotgun sequence (51876 bp)
Overview 1 RT 1: 9808-22484 bp Neighborhood of RT #1 [9808, 22484] KOG1000 RVT-GII Intron_maturas2 HNHc SF2_C_SNF RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 9808-10107 bp Feature: gene Location: 10178-11197 bp Feature: domain Description: KOG1000 Location: 10253-10448 bp Feature: domain Description: KOG1 000 Location: 1 0253-1 0448 bp Feature: gene Location: 11230-13041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11494-12316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 494-1 231 6 bp Feature: domain Description: Intron_maturas2 Location: 12385-12859 bp Feature: domain Description: Intron_maturas2 Location: 1 2385-1 2859 bp Feature: domain Description: HNHc Note: nucleases Location: 12859-13024 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2859-1 3024 bp Feature: gene Location: 13281-13481 bp Feature: gene Location: 13606-14028 bp Feature: domain Description: SF2_C_SNF Location: 13849-13996 bp Feature: domain Description: SF2_C_SNF Location: 1 3849-1 3996 bp Feature: gene Location: 14166-15953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14436-15228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4436-1 5228 bp Feature: domain Description: Intron_maturas2 Location: 15333-15564 bp Feature: domain Description: Intron_maturas2 Location: 1 5333-1 5564 bp Feature: domain Description: HNHc Note: nucleases Location: 15729-15915 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5729-1 591 5 bp Feature: gene Location: 16442-21883 bp Feature: domain Description: N6_Mtase Location: 18434-19025 bp Feature: domain Description: N6_Mtase Location: 1 8434-1 9025 bp Feature: domain Description: COG4646 Location: 19616-21740 bp Feature: domain Description: COG4646 Location: 1 961 6-21 740 bp Feature: gene Location: 21933-22484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )