myRT

myRT report for GCA_013372585.1_ASM1337258v1

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Seq: JABXEO010000019.1 Myxococcus sp. AM010 NODE_19_length_109047_cov_54.732_ID_5822, whole genome shotgun sequence (109047 bp)
Overview 1 RT 1: 28929-35994 bp Neighborhood of RT #1 [28929, 35994] EpmB COG3791 RVT-Retrons Feature: gene Location: 28929-30260 bp Feature: domain Description: EpmB Location: 28992-30078 bp Feature: domain Description: EpmB Location: 28992-30078 bp Feature: gene Location: 30599-31018 bp Feature: domain Description: COG3791 Location: 30626-30980 bp Feature: domain Description: COG3791 Location: 30626-30980 bp Feature: gene Location: 31027-32310 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31492-32095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 492-32095 bp Feature: gene Location: 32489-34087 bp Feature: gene Location: 34084-35994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EpmB (COG1509), COG3791 (Uncharacterized conserved protein ), RVT-Retrons

Seq: JABXEO010000025.1 Myxococcus sp. AM010 NODE_25_length_90112_cov_59.8731_ID_5834, whole genome shotgun sequence (90011 bp)
Overview 1 RT 1: 48919-61691 bp Neighborhood of RT #1 [48919, 61708] KOG0266 KOG0308 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 48919-55455 bp Feature: domain Description: KOG0266 Location: 49111-49528 bp Feature: domain Description: KOG02 66 Location: 49111-4952 8 bp Feature: domain Description: KOG0308 Location: 49645-49840 bp Feature: domain Description: KOG0308 Location: 49645-49840 bp Feature: domain Description: HEAT_2 Location: 49996-50209 bp Feature: domain Description: HEAT_2 Location: 49996-502 09 bp Feature: domain Description: HEAT_2 Location: 50761-51010 bp Feature: domain Description: HEAT_2 Location: 50761-51010 bp Feature: domain Description: HEAT_2 Location: 51250-51481 bp Feature: domain Description: HEAT_2 Location: 512 50-51481 bp Feature: domain Description: HEAT_2 Location: 51925-52099 bp Feature: domain Description: HEAT_2 Location: 5192 5-52 099 bp Feature: domain Description: HEAT_2 Location: 52180-52330 bp Feature: domain Description: HEAT_2 Location: 52 180-52 330 bp Feature: domain Description: HEAT_2 Location: 52699-52891 bp Feature: domain Description: HEAT_2 Location: 52 699-52 891 bp Feature: domain Description: HEAT_2 Location: 52936-53146 bp Feature: domain Description: HEAT_2 Location: 52 936-53146 bp Feature: domain Description: HEAT_2 Location: 53197-53434 bp Feature: domain Description: HEAT_2 Location: 53197-53434 bp Feature: domain Description: HEAT_2 Location: 54148-54370 bp Feature: domain Description: HEAT_2 Location: 54148-54370 bp Feature: domain Description: HEAT_2 Location: 54865-55102 bp Feature: domain Description: HEAT_2 Location: 54865-55102 bp Feature: domain Description: HEAT_2 Location: 55228-55366 bp Feature: domain Description: HEAT_2 Location: 552 2 8-55366 bp Feature: gene Location: 55452-57305 bp Feature: gene Location: 57706-59163 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58264-58906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 582 64-58906 bp Feature: gene Location: 59167-60033 bp Feature: domain Description: DAP2 Location: 59281-60013 bp Feature: domain Description: DAP2 Location: 592 81-60013 bp Feature: gene Location: 60185-61708 bp Feature: domain Description: BetA Location: 60200-60695 bp Feature: domain Description: BetA Location: 602 00-60695 bp Feature: domain Description: BetA Location: 60839-61109 bp Feature: domain Description: BetA Location: 60839-61109 bp Feature: domain Description: BetA Location: 61271-61691 bp Feature: domain Description: BetA Location: 612 71-61691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0266 (KOG0266, WD40 repeat-containing protein ), KOG0308 (KOG0308, Conserved WD40 repeat-containing protein ), HEAT_2 (pfam13646), RVT-Retrons, DAP2 (COG1506), BetA (COG2303)

Seq: JABXEO010000034.1 Myxococcus sp. AM010 NODE_34_length_77358_cov_50.5181_ID_5852, whole genome shotgun sequence (77358 bp)
Overview 1 RT 1: 71836-77209 bp Neighborhood of RT #1 [71836, 77209] COG1579 RNase_HI_like RVT-Retrons COG4941 Feature: gene Location: 71836-72567 bp Feature: domain Description: COG1579 Location: 71839-72538 bp Feature: domain Description: COG1579 Location: 7183 9-7253 8 bp Feature: gene Location: 72586-73224 bp Feature: domain Description: RNase_HI_like Location: 72835-73213 bp Feature: domain Description: RNase_HI_like Location: 7283 5-73 213 bp Feature: gene Location: 73262-74590 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73706-74360 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73 706-743 60 bp Feature: gene Location: 74958-76157 bp Feature: domain Description: COG4941 Location: 74964-76134 bp Feature: domain Description: COG4941 Location: 74964-7613 4 bp Feature: gene Location: 76649-77209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1579 (Predicted nucleic acid-binding protein, contains Zn-ribbon domain ), RNase_HI_like (cd09279), RVT-Retrons, COG4941 (Predicted RNA polymerase sigma factor, contains C-terminal TPR domain )