myRT

myRT report for GCA_013372595.1_ASM1337259v1

Download annotations/find similar RTs

Seq: JABXEM010000464.1 Myxococcus sp. AM011 NODE_464_length_3909_cov_28.5555, whole genome shotgun sequence (3909 bp)
Overview 1 RT 1: 2-3680 bp Neighborhood of RT #1 [2, 3907] RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 rpt_mate_G_obs LRR_RI RVT-Retrons Feature: gene Location: 2-1816 bp Feature: domain Description: RCC1 Location: 62-203 bp Feature: domain Description: RCC1 Location: 62-203 bp Feature: domain Description: RCC1 Location: 212-353 bp Feature: domain Description: RCC1 Location: 21 2-353 bp Feature: domain Description: RCC1 Location: 362-503 bp Feature: domain Description: RCC1 Location: 362-503 bp Feature: domain Description: RCC1 Location: 512-653 bp Feature: domain Description: RCC1 Location: 51 2-653 bp Feature: domain Description: RCC1 Location: 677-818 bp Feature: domain Description: RCC1 Location: 677-81 8 bp Feature: domain Description: RCC1 Location: 827-968 bp Feature: domain Description: RCC1 Location: 827-968 bp Feature: domain Description: RCC1 Location: 977-1118 bp Feature: domain Description: RCC1 Location: 977-1 1 1 8 bp Feature: domain Description: RCC1 Location: 1127-1268 bp Feature: domain Description: RCC1 Location: 1 1 27-1 268 bp Feature: domain Description: RCC1 Location: 1277-1418 bp Feature: domain Description: RCC1 Location: 1 277-1 41 8 bp Feature: domain Description: RCC1 Location: 1427-1568 bp Feature: domain Description: RCC1 Location: 1 427-1 568 bp Feature: domain Description: RCC1 Location: 1577-1712 bp Feature: domain Description: RCC1 Location: 1 577-1 71 2 bp Feature: domain Description: RCC1 Location: 1724-1811 bp Feature: domain Description: RCC1 Location: 1 724-1 81 1 bp Feature: gene Location: 1887-2861 bp Feature: domain Description: rpt_mate_G_obs Location: 1902-2013 bp Feature: domain Description: rpt_mate_G_obs Location: 1 902-201 3 bp Feature: domain Description: LRR_RI Location: 2379-2790 bp Feature: domain Description: LRR_RI Location: 2379-2790 bp Feature: gene Location: 2858-3907 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3089-3680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3089-3680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpt_mate_G_obs (TIGR02996), LRR_RI (smart00368), RCC1 (pfam00415), RVT-Retrons

Seq: JABXEM010000051.1 Myxococcus sp. AM011 NODE_51_length_48713_cov_38.2472, whole genome shotgun sequence (48713 bp)
Overview 1 RT 1: 28748-41577 bp Neighborhood of RT #1 [28748, 41597] WD40 WD40 WD40 WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DAP2 BetA BetA BetA Feature: gene Location: 28748-35278 bp Feature: domain Description: WD40 Location: 29009-29108 bp Feature: domain Description: WD40 Location: 2 9009-2 9108 bp Feature: domain Description: WD40 Location: 29126-29228 bp Feature: domain Description: WD40 Location: 2 912 6-2 92 2 8 bp Feature: domain Description: WD40 Location: 29270-29357 bp Feature: domain Description: WD40 Location: 2 92 70-2 9357 bp Feature: domain Description: WD40 Location: 29405-29522 bp Feature: domain Description: WD40 Location: 2 9405-2 952 2 bp Feature: domain Description: HEAT_2 Location: 29771-29984 bp Feature: domain Description: HEAT_2 Location: 2 9771-2 9984 bp Feature: domain Description: HEAT_2 Location: 30581-30830 bp Feature: domain Description: HEAT_2 Location: 30581-30830 bp Feature: domain Description: HEAT_2 Location: 30875-31028 bp Feature: domain Description: HEAT_2 Location: 30875-3102 8 bp Feature: domain Description: HEAT_2 Location: 31070-31274 bp Feature: domain Description: HEAT_2 Location: 31070-312 74 bp Feature: domain Description: HEAT Location: 31334-31631 bp Feature: domain Description: HEAT Location: 31334-31631 bp Feature: domain Description: HEAT_2 Location: 31745-31931 bp Feature: domain Description: HEAT_2 Location: 31745-31931 bp Feature: domain Description: HEAT_2 Location: 32522-32708 bp Feature: domain Description: HEAT_2 Location: 32 52 2 -32 708 bp Feature: domain Description: HEAT_2 Location: 32756-32963 bp Feature: domain Description: HEAT_2 Location: 32 756-32 963 bp Feature: domain Description: HEAT_2 Location: 33014-33224 bp Feature: domain Description: HEAT_2 Location: 33014-332 2 4 bp Feature: domain Description: HEAT_2 Location: 33233-33386 bp Feature: domain Description: HEAT_2 Location: 332 33-33386 bp Feature: domain Description: HEAT_2 Location: 33956-34190 bp Feature: domain Description: HEAT_2 Location: 33956-34190 bp Feature: domain Description: HEAT_2 Location: 34670-34919 bp Feature: domain Description: HEAT_2 Location: 34670-34919 bp Feature: domain Description: HEAT_2 Location: 35063-35216 bp Feature: domain Description: HEAT_2 Location: 35063-352 16 bp Feature: gene Location: 35275-37119 bp Feature: gene Location: 37529-38986 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38087-38729 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38087-3872 9 bp Feature: gene Location: 38997-39902 bp Feature: domain Description: DAP2 Location: 39126-39699 bp Feature: domain Description: DAP2 Location: 3912 6-39699 bp Feature: gene Location: 40071-41597 bp Feature: domain Description: BetA Location: 40074-40584 bp Feature: domain Description: BetA Location: 40074-40584 bp Feature: domain Description: BetA Location: 40725-40998 bp Feature: domain Description: BetA Location: 4072 5-40998 bp Feature: domain Description: BetA Location: 41163-41577 bp Feature: domain Description: BetA Location: 41163-41577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), HEAT (sd00044), RVT-Retrons, DAP2 (COG1506), BetA (COG2303)

Seq: JABXEM010000053.1 Myxococcus sp. AM011 NODE_53_length_48270_cov_42.4525, whole genome shotgun sequence (48270 bp)
Overview 1 RT 1: 28085-34356 bp Neighborhood of RT #1 [28085, 34356] UPF0227 RVT-Retrons Feature: gene Location: 28085-28612 bp Feature: domain Description: UPF0227 Location: 28115-28553 bp Feature: domain Description: UPF0227 Location: 28115-28553 bp Feature: gene Location: 28873-29223 bp Feature: gene Location: 29366-30646 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29828-30440 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29828-3 0440 bp Feature: gene Location: 30812-32458 bp Feature: gene Location: 32455-34356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0227 (pfam05728), RVT-Retrons