myRT

myRT report for GCA_013372615.1_ASM1337261v1

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Seq: JABXEN010000010.1 Myxococcus sp. AM001 NODE_10_length_83635_cov_40.4761, whole genome shotgun sequence (83635 bp)
Overview 1 RT 1: 22470-35170 bp Neighborhood of RT #1 [22470, 35259] BetA BetA BetA DAP2 RVT-Retrons WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 22470-23993 bp Feature: domain Description: BetA Location: 22485-22974 bp Feature: domain Description: BetA Location: 22485-22974 bp Feature: domain Description: BetA Location: 23121-23394 bp Feature: domain Description: BetA Location: 231 21 -23394 bp Feature: domain Description: BetA Location: 23559-23976 bp Feature: domain Description: BetA Location: 23559-23976 bp Feature: gene Location: 24145-25011 bp Feature: domain Description: DAP2 Location: 24271-24991 bp Feature: domain Description: DAP2 Location: 24271 -24991 bp Feature: gene Location: 25015-26472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25573-26215 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25573-2621 5 bp Feature: gene Location: 26873-28726 bp Feature: gene Location: 28723-35259 bp Feature: domain Description: WD40 Location: 28882-29578 bp Feature: domain Description: WD40 Location: 28882-29578 bp Feature: domain Description: HEAT_2 Location: 29800-29983 bp Feature: domain Description: HEAT_2 Location: 29800-29983 bp Feature: domain Description: HEAT_2 Location: 30565-30814 bp Feature: domain Description: HEAT_2 Location: 30565-3081 4 bp Feature: domain Description: HEAT_2 Location: 30856-31030 bp Feature: domain Description: HEAT_2 Location: 30856-31 030 bp Feature: domain Description: HEAT_2 Location: 31054-31285 bp Feature: domain Description: HEAT_2 Location: 31 054-31 285 bp Feature: domain Description: HEAT_2 Location: 31729-31903 bp Feature: domain Description: HEAT_2 Location: 31 729-31 903 bp Feature: domain Description: HEAT_2 Location: 31984-32146 bp Feature: domain Description: HEAT_2 Location: 31 984-321 46 bp Feature: domain Description: HEAT_2 Location: 32536-32704 bp Feature: domain Description: HEAT_2 Location: 32536-32704 bp Feature: domain Description: HEAT_2 Location: 32740-32950 bp Feature: domain Description: HEAT_2 Location: 32740-32950 bp Feature: domain Description: HEAT_2 Location: 33001-33256 bp Feature: domain Description: HEAT_2 Location: 33001 -33256 bp Feature: domain Description: HEAT_2 Location: 33952-34174 bp Feature: domain Description: HEAT_2 Location: 33952-341 74 bp Feature: domain Description: HEAT_2 Location: 34669-34906 bp Feature: domain Description: HEAT_2 Location: 34669-34906 bp Feature: domain Description: HEAT_2 Location: 35032-35170 bp Feature: domain Description: HEAT_2 Location: 35032-351 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BetA (COG2303), DAP2 (COG1506), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646)

Seq: JABXEN010000204.1 Myxococcus sp. AM001 NODE_204_length_13762_cov_32.9252, whole genome shotgun sequence (13762 bp)
Overview 1 RT 1: 11061-13414 bp Neighborhood of RT #1 [11061, 13584] ZapB RVT-GII GIIM Feature: gene Location: 11061-11888 bp Feature: gene Location: 11929-12213 bp Feature: domain Description: ZapB Location: 11968-12061 bp Feature: domain Description: ZapB Location: 11968-12 061 bp Feature: gene Location: 12346-13584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12466-13099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 466-13099 bp Feature: domain Description: GIIM Note: maturase Location: 13195-13414 bp Feature: domain Description: GIIM Note: maturase Location: 13195-13414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZapB (pfam06005), RVT-GII, GIIM (pfam08388)

Seq: JABXEN010000033.1 Myxococcus sp. AM001 NODE_33_length_62643_cov_38.3801, whole genome shotgun sequence (62643 bp)
Overview 1 RT 1: 53556-60436 bp Neighborhood of RT #1 [53556, 60621] RVT-Retrons COG3791 EpmB EpmB Feature: gene Location: 53556-55421 bp Feature: gene Location: 55418-57016 bp Feature: gene Location: 57195-58478 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57660-58263 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57660-58263 bp Feature: gene Location: 58487-58906 bp Feature: domain Description: COG3791 Location: 58514-58868 bp Feature: domain Description: COG3 791 Location: 58514-58868 bp Feature: gene Location: 59287-60621 bp Feature: domain Description: EpmB Location: 59350-59533 bp Feature: domain Description: EpmB Location: 593 50-5953 3 bp Feature: domain Description: EpmB Location: 59680-60436 bp Feature: domain Description: EpmB Location: 59680-6043 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3791 (Uncharacterized conserved protein ), EpmB (COG1509)

Seq: JABXEN010000343.1 Myxococcus sp. AM001 NODE_343_length_2032_cov_71.7129, whole genome shotgun sequence (2032 bp)
Overview 1 RT 1: 84-975 bp Neighborhood of RT #1 [84, 1343] RVT-GII Feature: gene Location: 84-1343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABXEN010000511.1 Myxococcus sp. AM001 NODE_511_length_682_cov_1.14595, whole genome shotgun sequence (682 bp)
Overview 1 RT 1: 3-516 bp Neighborhood of RT #1 [3, 680] RVT-GII Feature: gene Location: 3-680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 -5 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII