myRT

myRT report for GCA_013373785.1_ASM1337378v1

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Seq: JABXFA010000001.1 Bradyrhizobium sp. 162S2 Bradyrhizobium_sp_162S2_Contig1, whole genome shotgun sequence (9880962 bp)
Overview 1 RT 1: 2473716-2477841 bp 2 RT 2: 2527079-2530174 bp 3 RT 3: 2642563-2645369 bp 4 RT 4: 3050398-3055536 bp 5 RT 5: 4371760-4376881 bp 6 RT 6: 5246244-5252479 bp 7 RT 7: 5615872-5621822 bp 8 RT 8: 7996405-8002619 bp 9 RT 9: 8133182-8136578 bp 10 RT 10: 8207949-8211888 bp 11 RT 11: 8252066-8257330 bp 12 RT 12: 8386188-8389780 bp Neighborhood of RT #1 [2473716, 2477891] HTH_37 DDE_Tnp_ISL3 COG4679 RVT-GII GIIM COG3547 Neighborhood of RT #2 [2527079, 2530174] RVT-GII Neighborhood of RT #3 [2642563, 2645434] RVT-GII COG3436 Neighborhood of RT #4 [3050398, 3055536] HEPN_RES_NTD1 HEPN_RES_NTD1 RES RVT-GII GIIM IstB_IS21 Neighborhood of RT #5 [4371760, 4376889] TetR_N TetR_C_13 RVT-GII GIIM COG3547 LivF Neighborhood of RT #6 [5246244, 5252541] PRK07209 DUF4430 RVT-GII GIIM XerC XerD Neighborhood of RT #7 [5615872, 5621881] RVT-GII GIIM COG3547 MFS_NepI_like Neighborhood of RT #8 [7996405, 8002619] COG3547 COG3547 RVT-GII GIIM IS285 Neighborhood of RT #9 [8133182, 8136835] HTH_21 COG3547 RVT-GII GIIM Transposase_20 Neighborhood of RT #10 [8207949, 8211935] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM COG3436 Neighborhood of RT #11 [8252066, 8257377] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM COG3436 Neighborhood of RT #12 [8386188, 8389794] COG3436 RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 2473716-2474039 bp Feature: domain Description: HTH_37 Location: 2473755-2473992 bp Feature: domain Description: HTH_37 Location: 2473755-2473992 bp Feature: gene Location: 2474234-2474743 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2474315-2474444 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 247431 5-2474444 bp Feature: domain Description: COG4679 Location: 2474597-2474732 bp Feature: domain Description: COG4679 Location: 2474597-2474732 bp Feature: gene Location: 2475682-2476998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2475970-2476627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2475970-2476627 bp Feature: domain Description: GIIM Note: maturase Location: 2476702-2476906 bp Feature: domain Description: GIIM Note: maturase Location: 2476702-2476906 bp Feature: gene Location: 2477106-2477408 bp Feature: gene Location: 2477190-2477891 bp Feature: domain Description: COG3547 Location: 2477196-2477841 bp Feature: domain Description: COG3547 Location: 24771 96-2477841 bp Feature: gene Location: 2527079-2527210 bp Feature: gene Location: 2527231-2527359 bp Feature: gene Location: 2527569-2528813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2527770-2528454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2527770-2528454 bp Feature: gene Location: 2528827-2529816 bp Feature: gene Location: 2529926-2530174 bp Feature: gene Location: 2642563-2642694 bp Feature: gene Location: 2642715-2642843 bp Feature: gene Location: 2643053-2644297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2643254-2643938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2643254-2643938 bp Feature: gene Location: 2644311-2644592 bp Feature: gene Location: 2644742-2645434 bp Feature: domain Description: COG3436 Location: 2645072-2645369 bp Feature: domain Description: COG3436 Location: 2645072-2645369 bp Feature: gene Location: 3050398-3051624 bp Feature: domain Description: HEPN_RES_NTD1 Location: 3050485-3050740 bp Feature: domain Description: HEPN_RES_NTD1 Location: 3050485-3050740 bp Feature: domain Description: HEPN_RES_NTD1 Location: 3050851-3050932 bp Feature: domain Description: HEPN_RES_NTD1 Location: 3050851 -3050932 bp Feature: domain Description: RES Location: 3051109-3051508 bp Feature: domain Description: RES Location: 3051 1 09-3051 508 bp Feature: gene Location: 3051674-3052564 bp Feature: gene Location: 3053264-3054514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3053468-3054128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3053468-30541 28 bp Feature: domain Description: GIIM Note: maturase Location: 3054209-3054422 bp Feature: domain Description: GIIM Note: maturase Location: 3054209-3054422 bp Feature: gene Location: 3054539-3055351 bp Feature: domain Description: IstB_IS21 Location: 3054701-3055226 bp Feature: domain Description: IstB_IS21 Location: 3054701 -3055226 bp Feature: gene Location: 3055351-3055536 bp Feature: gene Location: 4371760-4372392 bp Feature: domain Description: TetR_N Location: 4371844-4371967 bp Feature: domain Description: TetR_N Location: 4371 844-4371 967 bp Feature: domain Description: TetR_C_13 Location: 4372045-4372384 bp Feature: domain Description: TetR_C_1 3 Location: 4372045-4372384 bp Feature: gene Location: 4372778-4372984 bp Feature: gene Location: 4373515-4374831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4373803-4374460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4373803-4374460 bp Feature: domain Description: GIIM Note: maturase Location: 4374535-4374739 bp Feature: domain Description: GIIM Note: maturase Location: 4374535-4374739 bp Feature: gene Location: 4375008-4375727 bp Feature: domain Description: COG3547 Location: 4375014-4375680 bp Feature: domain Description: COG3547 Location: 437501 4-4375680 bp Feature: gene Location: 4376176-4376889 bp Feature: domain Description: LivF Location: 4376185-4376881 bp Feature: domain Description: LivF Location: 43761 85-4376881 bp Feature: gene Location: 5246244-5247374 bp Feature: domain Description: PRK07209 Location: 5246325-5247372 bp Feature: domain Description: PRK07209 Location: 5246325-5247372 bp Feature: gene Location: 5247402-5247800 bp Feature: domain Description: DUF4430 Location: 5247537-5247699 bp Feature: domain Description: DUF4430 Location: 5247537-5247699 bp Feature: gene Location: 5248363-5249679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5248651-5249308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5248651 -5249308 bp Feature: domain Description: GIIM Note: maturase Location: 5249383-5249587 bp Feature: domain Description: GIIM Note: maturase Location: 5249383-5249587 bp Feature: gene Location: 5249814-5250872 bp Feature: domain Description: XerC Location: 5250243-5250807 bp Feature: domain Description: XerC Location: 5250243-5250807 bp Feature: gene Location: 5250856-5252541 bp Feature: domain Description: XerD Location: 5252182-5252479 bp Feature: domain Description: XerD Location: 52521 82-5252479 bp Feature: gene Location: 5615872-5617179 bp Feature: gene Location: 5617445-5617651 bp Feature: gene Location: 5618182-5619498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5618470-5619127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561 8470-561 91 27 bp Feature: domain Description: GIIM Note: maturase Location: 5619202-5619406 bp Feature: domain Description: GIIM Note: maturase Location: 561 9202-561 9406 bp Feature: gene Location: 5619675-5620394 bp Feature: domain Description: COG3547 Location: 5619681-5620347 bp Feature: domain Description: COG3547 Location: 561 9681 -5620347 bp Feature: gene Location: 5620673-5621881 bp Feature: domain Description: MFS_NepI_like Location: 5620712-5621822 bp Feature: domain Description: MFS_NepI_like Location: 562071 2-5621 822 bp Feature: gene Location: 7996405-7997433 bp Feature: domain Description: COG3547 Location: 7996417-7997383 bp Feature: domain Description: COG3547 Location: 799641 7-7997383 bp Feature: gene Location: 7997840-7998745 bp Feature: domain Description: COG3547 Location: 7997960-7998695 bp Feature: domain Description: COG3547 Location: 7997960-7998695 bp Feature: gene Location: 7998733-8000049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7999021-7999678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7999021 -7999678 bp Feature: domain Description: GIIM Note: maturase Location: 7999753-7999957 bp Feature: domain Description: GIIM Note: maturase Location: 7999753-7999957 bp Feature: gene Location: 8001030-8002313 bp Feature: domain Description: IS285 Location: 8001087-8002212 bp Feature: domain Description: IS285 Location: 8001 087-800221 2 bp Feature: gene Location: 8002326-8002619 bp Feature: gene Location: 8133182-8133823 bp Feature: domain Description: HTH_21 Location: 8133464-8133611 bp Feature: domain Description: HTH_21 Location: 81 33464-81 3361 1 bp Feature: gene Location: 8133886-8134218 bp Feature: domain Description: COG3547 Location: 8133910-8134195 bp Feature: domain Description: COG3547 Location: 81 3391 0-81 341 95 bp Feature: gene Location: 8134354-8135604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8134558-8135218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 34558-81 3521 8 bp Feature: domain Description: GIIM Note: maturase Location: 8135299-8135512 bp Feature: domain Description: GIIM Note: maturase Location: 81 35299-81 3551 2 bp Feature: gene Location: 8136260-8136472 bp Feature: gene Location: 8136350-8136835 bp Feature: domain Description: Transposase_20 Location: 8136353-8136578 bp Feature: domain Description: Transposase_20 Location: 81 36353-81 36578 bp Feature: gene Location: 8207949-8208446 bp Feature: gene Location: 8208555-8209550 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8208576-8209380 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8208576-8209380 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8209401-8209515 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8209401 -820951 5 bp Feature: gene Location: 8209589-8210848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8209793-8210450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8209793-821 0450 bp Feature: domain Description: GIIM Note: maturase Location: 8210531-8210741 bp Feature: domain Description: GIIM Note: maturase Location: 821 0531 -821 0741 bp Feature: gene Location: 8210862-8211182 bp Feature: gene Location: 8211339-8211935 bp Feature: domain Description: COG3436 Location: 8211570-8211888 bp Feature: domain Description: COG3436 Location: 821 1 570-821 1 888 bp Feature: gene Location: 8252066-8253718 bp Feature: domain Description: LZ_Tnp_IS66 Location: 8252213-8252444 bp Feature: domain Description: LZ_Tnp_IS66 Location: 825221 3-8252444 bp Feature: domain Description: zf-IS66 Location: 8252459-8252594 bp Feature: domain Description: zf-IS66 Location: 8252459-8252594 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8252639-8253533 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8252639-8253533 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8253554-8253665 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8253554-8253665 bp Feature: gene Location: 8253997-8254992 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8254018-8254822 bp Feature: domain Description: DDE_Tnp_IS66 Location: 825401 8-8254822 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8254843-8254957 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8254843-8254957 bp Feature: gene Location: 8255031-8256290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8255235-8255892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8255235-8255892 bp Feature: domain Description: GIIM Note: maturase Location: 8255973-8256183 bp Feature: domain Description: GIIM Note: maturase Location: 8255973-82561 83 bp Feature: gene Location: 8256304-8256624 bp Feature: gene Location: 8256781-8257377 bp Feature: domain Description: COG3436 Location: 8257012-8257330 bp Feature: domain Description: COG3436 Location: 825701 2-8257330 bp Feature: gene Location: 8386188-8386880 bp Feature: domain Description: COG3436 Location: 8386518-8386815 bp Feature: domain Description: COG3436 Location: 838651 8-838681 5 bp Feature: gene Location: 8387030-8387428 bp Feature: gene Location: 8387325-8388569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8387526-8388210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8387526-838821 0 bp Feature: gene Location: 8388779-8388907 bp Feature: gene Location: 8389330-8389794 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8389336-8389645 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8389336-8389645 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8389666-8389780 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8389666-8389780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_37 (pfam13744), DDE_Tnp_ISL3 (pfam01610), COG4679 (Phage-related protein ), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), COG3436 (Transposase ), HEPN_RES_NTD1 (pfam18870), RES (smart00953), IstB_IS21 (pfam01695)
TetR_N (pfam00440), TetR_C_13 (pfam16925), LivF (COG0410), PRK07209 (ribonucleotide-diphosphate reductase subunit beta; Validated), DUF4430 (pfam14478), XerC (COG4973), XerD (COG4974), MFS_NepI_like (cd17324), IS285 (COG3328), HTH_21 (pfam13276)
Transposase_20 (pfam02371), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)

Seq: JABXFA010000002.1 Bradyrhizobium sp. 162S2 Bradyrhizobium_sp_162S2_Contig2, whole genome shotgun sequence (332795 bp)
Overview 1 RT 1: 12297-17399 bp 2 RT 2: 113800-119137 bp 3 RT 3: 254036-258549 bp 4 RT 4: 275050-280796 bp 5 RT 5: 293259-296790 bp Neighborhood of RT #1 [12297, 17443] COG3547 RVT-GII GIIM COG3547 PRK08181 Neighborhood of RT #2 [113800, 119178] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT-GII GIIM Transposase_mut TnpB_IS66 Neighborhood of RT #3 [254036, 258569] IstB_IS21 RVT-GII GIIM INT_Cre_C Neighborhood of RT #4 [275050, 280828] RVT-GII GIIM DDE_Tnp_1_4 RVT-GII KU_like Neighborhood of RT #5 [293259, 296828] COG3547 RVT-GII GIIM COG3547 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 12297-13286 bp Feature: gene Location: 13672-14433 bp Feature: domain Description: COG3547 Location: 13678-14383 bp Feature: domain Description: COG3547 Location: 13678-14383 bp Feature: gene Location: 14565-15881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14853-15510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14853-15510 bp Feature: domain Description: GIIM Note: maturase Location: 15585-15789 bp Feature: domain Description: GIIM Note: maturase Location: 15585-15789 bp Feature: gene Location: 16310-16621 bp Feature: domain Description: COG3547 Location: 16328-16577 bp Feature: domain Description: COG3547 Location: 1632 8-16577 bp Feature: gene Location: 16814-17443 bp Feature: domain Description: PRK08181 Location: 16817-17399 bp Feature: domain Description: PRK08181 Location: 16817-17399 bp Feature: gene Location: 113800-115470 bp Feature: domain Description: LZ_Tnp_IS66 Location: 113968-114199 bp Feature: domain Description: LZ_Tnp_IS66 Location: 113968-114199 bp Feature: domain Description: zf-IS66 Location: 114214-114349 bp Feature: domain Description: zf-IS66 Location: 1142 14-114349 bp Feature: domain Description: DDE_Tnp_IS66 Location: 114394-115288 bp Feature: domain Description: DDE_Tnp_IS66 Location: 114394-1152 88 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 115309-115420 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 115309-11542 0 bp Feature: gene Location: 115517-115669 bp Feature: domain Description: TnpB_IS66 Location: 115520-115640 bp Feature: domain Description: TnpB_IS66 Location: 11552 0-115640 bp Feature: gene Location: 115745-117019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115955-116612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115955-116612 bp Feature: domain Description: GIIM Note: maturase Location: 116696-116918 bp Feature: domain Description: GIIM Note: maturase Location: 116696-116918 bp Feature: gene Location: 117308-118639 bp Feature: domain Description: Transposase_mut Location: 117416-118523 bp Feature: domain Description: Transposase_mut Location: 117416-11852 3 bp Feature: gene Location: 118960-119178 bp Feature: domain Description: TnpB_IS66 Location: 118987-119137 bp Feature: domain Description: TnpB_IS66 Location: 118987-119137 bp Feature: gene Location: 254036-254986 bp Feature: gene Location: 254983-255477 bp Feature: domain Description: IstB_IS21 Location: 255055-255352 bp Feature: domain Description: IstB_IS2 1 Location: 2 55055-2 55352 bp Feature: gene Location: 255502-256752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255706-256366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 55706-2 56366 bp Feature: domain Description: GIIM Note: maturase Location: 256447-256660 bp Feature: domain Description: GIIM Note: maturase Location: 2 56447-2 56660 bp Feature: gene Location: 256752-257153 bp Feature: gene Location: 257496-258569 bp Feature: domain Description: INT_Cre_C Location: 257973-258549 bp Feature: domain Description: INT_Cre_C Location: 2 57973-2 58549 bp Feature: gene Location: 275050-276363 bp Feature: gene Location: 276386-276631 bp Feature: gene Location: 276739-277410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276757-277039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76757-2 77039 bp Feature: domain Description: GIIM Note: maturase Location: 277114-277318 bp Feature: domain Description: GIIM Note: maturase Location: 2 77114-2 77318 bp Feature: gene Location: 277588-278931 bp Feature: domain Description: DDE_Tnp_1_4 Location: 277624-278902 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2 7762 4-2 78902 bp Feature: gene Location: 279083-279691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279371-279677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 79371-2 79677 bp Feature: gene Location: 280223-280447 bp Feature: gene Location: 280616-280828 bp Feature: domain Description: KU_like Location: 280619-280796 bp Feature: domain Description: KU_like Location: 2 80619-2 80796 bp Feature: gene Location: 293259-293570 bp Feature: domain Description: COG3547 Location: 293277-293526 bp Feature: domain Description: COG3547 Location: 2 932 77-2 9352 6 bp Feature: gene Location: 293725-293874 bp Feature: gene Location: 293999-295315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294287-294944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 942 87-2 94944 bp Feature: domain Description: GIIM Note: maturase Location: 295019-295223 bp Feature: domain Description: GIIM Note: maturase Location: 2 95019-2 952 2 3 bp Feature: gene Location: 295477-296220 bp Feature: domain Description: COG3547 Location: 295483-296158 bp Feature: domain Description: COG3547 Location: 2 95483-2 96158 bp Feature: gene Location: 296403-296828 bp Feature: domain Description: DDE_Tnp_IS66 Location: 296505-296661 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 96505-2 96661 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 296682-296790 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 96682 -2 96790 bp Sorry, 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Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PRK08181 (transposase; Validated), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), Transposase_mut (pfam00872)
IstB_IS21 (pfam01695), INT_Cre_C (cd00799), DDE_Tnp_1_4 (pfam13701), KU_like (cd00789)

Seq: JABXFA010000003.1 Bradyrhizobium sp. 162S2 Bradyrhizobium_sp_162S2_Contig3, whole genome shotgun sequence (440548 bp)
Overview 1 RT 1: 40334-43844 bp 2 RT 2: 85320-88576 bp 3 RT 3: 146609-150029 bp 4 RT 4: 188789-193081 bp 5 RT 5: 272987-278013 bp 6 RT 6: 344321-390253 bp Neighborhood of RT #1 [40334, 43844] COG3547 RVT-GII GIIM COG3547 Neighborhood of RT #2 [85320, 88611] COG3436 RVT-GII GIIM InsE TnpB_IS66 Neighborhood of RT #3 [146609, 150058] COG3547 RVT-GII GIIM COG3547 DDE_Tnp_1_4 Neighborhood of RT #4 [188789, 193081] COG3547 RVT-GII GIIM COG3547 Neighborhood of RT #5 [272987, 278210] COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Arm-DNA-bind_3 Phage_int_SAM_3 INT_Rci_Hp1_C Neighborhood of RT #6 [344321, 390253] FMT_core_NRPS_like FMT_C_OzmH_like PRK12316 PRK12316 PRK12316 PRK12316 PRK12316 PRK12316 PRK12316 PRK12316 PRK12316 PRK12316 PRK12316 LC_FACS_like PRK05691 PRK12316 PRK12316 PRK12316 PRK12316 LC_FACS_like PRK05691 EntF RVT-GII GIIM PRK06526 Feature: gene Location: 40334-40645 bp Feature: domain Description: COG3547 Location: 40352-40601 bp Feature: domain Description: COG3 547 Location: 403 52-40601 bp Feature: gene Location: 40800-40949 bp Feature: gene Location: 41074-42390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41362-42019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413 62-42019 bp Feature: domain Description: GIIM Note: maturase Location: 42094-42298 bp Feature: domain Description: GIIM Note: maturase Location: 42094-42298 bp Feature: gene Location: 42552-43295 bp Feature: domain Description: COG3547 Location: 42558-43233 bp Feature: domain Description: COG3 547 Location: 42558-43 23 3 bp Feature: gene Location: 43476-43844 bp Feature: gene Location: 85320-85922 bp Feature: domain Description: COG3436 Location: 85557-85875 bp Feature: domain Description: COG3 43 6 Location: 85557-85875 bp Feature: gene Location: 86079-86399 bp Feature: gene Location: 86413-87672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86617-87274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86617-87274 bp Feature: domain Description: GIIM Note: maturase Location: 87355-87565 bp Feature: domain Description: GIIM Note: maturase Location: 873 55-87565 bp Feature: gene Location: 87831-88277 bp Feature: domain Description: InsE Location: 87888-88104 bp Feature: domain Description: InsE Location: 87888-88104 bp Feature: gene Location: 88258-88611 bp Feature: domain Description: TnpB_IS66 Location: 88285-88576 bp Feature: domain Description: TnpB_IS66 Location: 88285-88576 bp Feature: gene Location: 146609-146920 bp Feature: domain Description: COG3547 Location: 146627-146876 bp Feature: domain Description: COG3 547 Location: 146627-146876 bp Feature: gene Location: 147075-147224 bp Feature: gene Location: 147349-148665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147637-148294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14763 7-148294 bp Feature: domain Description: GIIM Note: maturase Location: 148369-148573 bp Feature: domain Description: GIIM Note: maturase Location: 1483 69-148573 bp Feature: gene Location: 148827-149570 bp Feature: domain Description: COG3547 Location: 148833-149508 bp Feature: domain Description: COG3 547 Location: 14883 3 -149508 bp Feature: gene Location: 149897-150058 bp Feature: domain Description: DDE_Tnp_1_4 Location: 149900-150029 bp Feature: domain Description: DDE_Tnp_1_4 Location: 149900-150029 bp Feature: gene Location: 188789-189100 bp Feature: domain Description: COG3547 Location: 188807-189056 bp Feature: domain Description: COG3 547 Location: 188807-189056 bp Feature: gene Location: 189255-189404 bp Feature: gene Location: 189529-190845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189817-190474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189817-190474 bp Feature: domain Description: GIIM Note: maturase Location: 190549-190753 bp Feature: domain Description: GIIM Note: maturase Location: 190549-190753 bp Feature: gene Location: 190977-191738 bp Feature: domain Description: COG3547 Location: 190983-191688 bp Feature: domain Description: COG3 547 Location: 190983 -191688 bp Feature: gene Location: 192437-193081 bp Feature: gene Location: 272987-273589 bp Feature: domain Description: COG3436 Location: 273224-273542 bp Feature: domain Description: COG3 43 6 Location: 273 224-273 542 bp Feature: gene Location: 273746-274066 bp Feature: gene Location: 274080-275339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274284-274941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274284-274941 bp Feature: domain Description: GIIM Note: maturase Location: 275022-275232 bp Feature: domain Description: GIIM Note: maturase Location: 275022-27523 2 bp Feature: gene Location: 275378-276373 bp Feature: domain Description: DDE_Tnp_IS66 Location: 275399-276203 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2753 99-276203 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 276224-276338 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 276224-2763 3 8 bp Feature: gene Location: 276852-278210 bp Feature: domain Description: Arm-DNA-bind_3 Location: 276864-277119 bp Feature: domain Description: Arm-DNA-bind_3 Location: 276864-277119 bp Feature: domain Description: Phage_int_SAM_3 Location: 277218-277332 bp Feature: domain Description: Phage_int_SAM_3 Location: 277218-2773 3 2 bp Feature: domain Description: INT_Rci_Hp1_C Location: 277524-278013 bp Feature: domain Description: INT_Rci_Hp1_C Location: 277524-278013 bp Feature: gene Location: 344321-387616 bp Feature: domain Description: FMT_core_NRPS_like Location: 344327-344753 bp Feature: domain Description: FMT_core_NRPS_like Location: 3 443 27-3 44753 bp Feature: domain Description: FMT_C_OzmH_like Location: 344837-345131 bp Feature: domain Description: FMT_C_OzmH_like Location: 3 4483 7-3 4513 1 bp Feature: domain Description: PRK12316 Location: 345722-347765 bp Feature: domain Description: PRK123 16 Location: 3 45722-3 47765 bp Feature: domain Description: PRK12316 Location: 347801-350960 bp Feature: domain Description: PRK123 16 Location: 3 47801-3 50960 bp Feature: domain Description: PRK12316 Location: 351008-354236 bp Feature: domain Description: PRK123 16 Location: 3 51008-3 5423 6 bp Feature: domain Description: PRK12316 Location: 354272-357491 bp Feature: domain Description: PRK123 16 Location: 3 54272-3 57491 bp Feature: domain Description: PRK12316 Location: 357527-360683 bp Feature: domain Description: PRK123 16 Location: 3 57527-3 60683 bp Feature: domain Description: PRK12316 Location: 360734-363977 bp Feature: domain Description: PRK123 16 Location: 3 6073 4-3 63 977 bp Feature: domain Description: PRK12316 Location: 364010-365288 bp Feature: domain Description: PRK123 16 Location: 3 64010-3 65288 bp Feature: domain Description: PRK12316 Location: 365336-367223 bp Feature: domain Description: PRK123 16 Location: 3 653 3 6-3 67223 bp Feature: domain Description: PRK12316 Location: 367271-370505 bp Feature: domain Description: PRK123 16 Location: 3 67271-3 70505 bp Feature: domain Description: PRK12316 Location: 370541-373700 bp Feature: domain Description: PRK123 16 Location: 3 70541-3 73 700 bp Feature: domain Description: PRK12316 Location: 373751-375551 bp Feature: domain Description: PRK123 16 Location: 3 73 751-3 75551 bp Feature: domain Description: LC_FACS_like Location: 375659-375746 bp Feature: domain Description: LC_FACS_like Location: 3 75659-3 75746 bp Feature: domain Description: PRK05691 Location: 376178-376967 bp Feature: domain Description: PRK05691 Location: 3 76178-3 76967 bp Feature: domain Description: PRK12316 Location: 377006-378281 bp Feature: domain Description: PRK123 16 Location: 3 77006-3 78281 bp Feature: domain Description: PRK12316 Location: 378332-380249 bp Feature: domain Description: PRK123 16 Location: 3 783 3 2-3 80249 bp Feature: domain Description: PRK12316 Location: 380291-383450 bp Feature: domain Description: PRK123 16 Location: 3 80291-3 83 450 bp Feature: domain Description: PRK12316 Location: 383501-385301 bp Feature: domain Description: PRK123 16 Location: 3 83 501-3 853 01 bp Feature: domain Description: LC_FACS_like Location: 385409-385496 bp Feature: domain Description: LC_FACS_like Location: 3 85409-3 85496 bp Feature: domain Description: PRK05691 Location: 385901-386714 bp Feature: domain Description: PRK05691 Location: 3 85901-3 86714 bp Feature: domain Description: EntF Location: 386777-387527 bp Feature: domain Description: EntF Location: 3 86777-3 87527 bp Feature: gene Location: 387871-388272 bp Feature: gene Location: 388272-389522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388476-389136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 88476-3 8913 6 bp Feature: domain Description: GIIM Note: maturase Location: 389217-389430 bp Feature: domain Description: GIIM Note: maturase Location: 3 89217-3 8943 0 bp Feature: gene Location: 389547-389738 bp Feature: domain Description: PRK06526 Location: 389550-389655 bp Feature: domain Description: PRK06526 Location: 3 89550-3 89655 bp Feature: gene Location: 389768-390253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), COG3436 (Transposase ), InsE (COG2963), TnpB_IS66 (pfam05717), DDE_Tnp_1_4 (pfam13701), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), Arm-DNA-bind_3 (pfam13356)
Phage_int_SAM_3 (pfam14659), INT_Rci_Hp1_C (cd00796), FMT_core_NRPS_like (cd08649), FMT_C_OzmH_like (cd08700), PRK12316 (peptide synthase; Provisional), LC_FACS_like (cd17640), PRK05691 (peptide synthase; Validated), EntF (COG3319), PRK06526 (transposase; Provisional)