myRT

myRT report for GCA_013373955.1_ASM1337395v1

Download annotations/find similar RTs

Seq: BLXO01000001.1 Candidatus Regiella insecticola Tut DNA, Contig01_1141, whole genome shotgun sequence (699065 bp)
Overview 1 RT 1: 286958-290674 bp 2 RT 2: 377467-380063 bp 3 RT 3: 485073-491975 bp Neighborhood of RT #1 [286958, 290883] HTH_Tnp_IS630 RVT-GII SR_Res_par Neighborhood of RT #2 [377467, 380074] HigB VapI RVT-GII GIIM Phage_TAC_4 Phage_tail_3 Neighborhood of RT #3 [485073, 491992] PRK15137 RVT-GII GIIM metK HemF Feature: gene Location: 286958-287119 bp Feature: gene Location: 287310-287627 bp Feature: domain Description: HTH_Tnp_IS630 Location: 287313-287613 bp Feature: domain Description: HTH_Tnp_IS630 Location: 28731 3-28761 3 bp Feature: gene Location: 287632-288750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287917-288604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28791 7-288604 bp Feature: gene Location: 289508-290059 bp Feature: gene Location: 290209-290883 bp Feature: domain Description: SR_Res_par Location: 290239-290674 bp Feature: domain Description: SR_Res_par Location: 290239-290674 bp Feature: gene Location: 377467-377715 bp Feature: domain Description: HigB Location: 377476-377707 bp Feature: domain Description: HigB Location: 377476-377707 bp Feature: gene Location: 377728-378057 bp Feature: domain Description: VapI Location: 377740-378001 bp Feature: domain Description: VapI Location: 377740-378001 bp Feature: gene Location: 378230-379441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378395-379082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378395-379082 bp Feature: domain Description: GIIM Note: maturase Location: 379199-379370 bp Feature: domain Description: GIIM Note: maturase Location: 3791 99-379370 bp Feature: gene Location: 379472-379783 bp Feature: domain Description: Phage_TAC_4 Location: 379475-379781 bp Feature: domain Description: Phage_TAC_4 Location: 379475-379781 bp Feature: gene Location: 379793-380074 bp Feature: domain Description: Phage_tail_3 Location: 379799-380063 bp Feature: domain Description: Phage_tail_3 Location: 379799-380063 bp Feature: gene Location: 485073-485675 bp Feature: domain Description: PRK15137 Location: 485076-485652 bp Feature: domain Description: PRK1 51 37 Location: 485076-485652 bp Feature: gene Location: 486225-487433 bp Feature: gene Location: 488018-489349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488303-488990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488303-488990 bp Feature: domain Description: GIIM Note: maturase Location: 489101-489275 bp Feature: domain Description: GIIM Note: maturase Location: 4891 01 -489275 bp Feature: gene Location: 489621-490790 bp Feature: domain Description: metK Location: 489636-490755 bp Feature: domain Description: metK Location: 489636-490755 bp Feature: gene Location: 490976-491992 bp Feature: domain Description: HemF Location: 491078-491975 bp Feature: domain Description: HemF Location: 491 078-491 975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_IS630 (pfam01710), RVT-GII, SR_Res_par (cd03767), HigB (COG4680), VapI (COG3093), GIIM (pfam08388), Phage_TAC_4 (pfam08748), Phage_tail_3 (pfam08813), PRK15137 (DNA-specific endonuclease I; Provisional), metK (TIGR01034)
HemF (COG0408)

Seq: BLXO01000003.1 Candidatus Regiella insecticola Tut DNA, Contig03_1129, whole genome shotgun sequence (335627 bp)
Overview 1 RT 1: 291253-294287 bp Neighborhood of RT #1 [291253, 294298] HTH_Tnp_IS630 RVT-GII GIIM RVT-GII GIIM PHA02517 Lipase_2 Feature: gene Location: 291253-291444 bp Feature: gene Location: 291668-292219 bp Feature: domain Description: HTH_Tnp_IS630 Location: 291689-292025 bp Feature: domain Description: HTH_Tnp_IS630 Location: 2 91689-2 92 02 5 bp Feature: gene Location: 292228-292728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292261-292345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 2 61-2 92 345 bp Feature: domain Description: GIIM Note: maturase Location: 292417-292630 bp Feature: domain Description: GIIM Note: maturase Location: 2 92 417-2 92 630 bp Feature: gene Location: 292785-293378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292833-292995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 833-2 92 995 bp Feature: domain Description: GIIM Note: maturase Location: 293070-293286 bp Feature: domain Description: GIIM Note: maturase Location: 2 93070-2 932 86 bp Feature: gene Location: 293572-293778 bp Feature: domain Description: PHA02517 Location: 293575-293755 bp Feature: domain Description: PHA02 517 Location: 2 93575-2 93755 bp Feature: gene Location: 294083-294298 bp Feature: domain Description: Lipase_2 Location: 294113-294287 bp Feature: domain Description: Lipase_2 Location: 2 94113-2 942 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_IS630 (pfam01710), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Lipase_2 (pfam01674)

Seq: BLXO01000004.1 Candidatus Regiella insecticola Tut DNA, Contig04_1143, whole genome shotgun sequence (291246 bp)
Overview 1 RT 1: 99-2495 bp Neighborhood of RT #1 [99, 2566] RVT-GII PAS_4 HTH_LUXR Feature: gene Location: 99-1181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 84-999 bp Feature: gene Location: 1608-1775 bp Feature: gene Location: 1844-2566 bp Feature: domain Description: PAS_4 Location: 1934-2252 bp Feature: domain Description: PAS_4 Location: 193 4-2252 bp Feature: domain Description: HTH_LUXR Location: 2333-2495 bp Feature: domain Description: HTH_LUXR Location: 23 3 3 -2495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PAS_4 (pfam08448), HTH_LUXR (smart00421)

Seq: BLXO01000005.1 Candidatus Regiella insecticola Tut DNA, Contig05_2462_1146_2, whole genome shotgun sequence (192120 bp)
Overview 1 RT 1: 159706-167868 bp Neighborhood of RT #1 [159706, 167868] HTH_Tnp_IS630 RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 159706-159867 bp Feature: gene Location: 160058-160399 bp Feature: domain Description: HTH_Tnp_IS630 Location: 160079-160385 bp Feature: domain Description: HTH_Tnp_IS630 Location: 160079-160385 bp Feature: gene Location: 160793-161359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160805-160991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160805-160991 bp Feature: domain Description: GIIM Note: maturase Location: 161048-161276 bp Feature: domain Description: GIIM Note: maturase Location: 16104 8-161276 bp Feature: gene Location: 161367-163079 bp Feature: domain Description: Resolvase Location: 161385-161823 bp Feature: domain Description: Resolvase Location: 161385-161823 bp Feature: domain Description: Recombinase Location: 161916-162276 bp Feature: domain Description: Recombinase Location: 161916-162276 bp Feature: domain Description: Zn_ribbon_recom Location: 162318-162519 bp Feature: domain Description: Zn_ribbon_recom Location: 162318-162519 bp Feature: gene Location: 163386-164117 bp Feature: domain Description: RVT_N Location: 163437-163680 bp Feature: domain Description: RVT_N Location: 1634 37-163680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163725-164091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163725-164 091 bp Feature: gene Location: 164154-164528 bp Feature: gene Location: 164724-166055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165009-165696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165009-165696 bp Feature: domain Description: GIIM Note: maturase Location: 165807-165981 bp Feature: domain Description: GIIM Note: maturase Location: 165807-165981 bp Feature: gene Location: 166681-166956 bp Feature: gene Location: 167092-167868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_IS630 (pfam01710), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT_N (pfam13655)

Seq: BLXO01000006.1 Candidatus Regiella insecticola Tut DNA, Contig06_1158, whole genome shotgun sequence (156903 bp)
Overview 1 RT 1: 154432-156902 bp Neighborhood of RT #1 [154432, 156901] DDE_3 HTH_Tnp_4 DDE_Tnp_4 RVT-GII Feature: gene Location: 154432-154656 bp Feature: domain Description: DDE_3 Location: 154453-154612 bp Feature: domain Description: DDE_3 Location: 15 445 3-15 4612 bp Feature: gene Location: 155266-156165 bp Feature: domain Description: HTH_Tnp_4 Location: 155443-155590 bp Feature: domain Description: HTH_Tnp_4 Location: 15 5 443-15 5 5 90 bp Feature: domain Description: DDE_Tnp_4 Location: 155677-156121 bp Feature: domain Description: DDE_Tnp_4 Location: 15 5 677-15 6121 bp Feature: gene Location: 156293-156901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156578-156902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 65 78-15 6902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359), RVT-GII

Seq: BLXO01000008.1 Candidatus Regiella insecticola Tut DNA, Contig08_1069, whole genome shotgun sequence (114352 bp)
Overview 1 RT 1: 101368-105136 bp Neighborhood of RT #1 [101368, 105141] DDE_3 mob_myst_B RVT-GII GIIM HTH_Tnp_IS630 RVT-GII mob_myst_A Feature: gene Location: 101368-101799 bp Feature: domain Description: DDE_3 Location: 101371-101758 bp Feature: domain Description: DDE_3 Location: 101371-101758 bp Feature: gene Location: 101801-102106 bp Feature: domain Description: mob_myst_B Location: 101849-102089 bp Feature: domain Description: mob_myst_B Location: 101849-102089 bp Feature: gene Location: 102186-102926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102195-102567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102195-10256 7 bp Feature: domain Description: GIIM Note: maturase Location: 102678-102852 bp Feature: domain Description: GIIM Note: maturase Location: 1026 78-102852 bp Feature: gene Location: 102935-103270 bp Feature: domain Description: HTH_Tnp_IS630 Location: 102956-103256 bp Feature: domain Description: HTH_Tnp_IS6 30 Location: 102956 -103256 bp Feature: gene Location: 103461-103622 bp Feature: gene Location: 103703-104398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103988-104324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103988-104324 bp Feature: gene Location: 104658-104816 bp Feature: gene Location: 104896-105141 bp Feature: domain Description: mob_myst_A Location: 104899-105136 bp Feature: domain Description: mob_myst_A Location: 104899-105136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), mob_myst_B (TIGR02613), RVT-GII, GIIM (pfam08388), HTH_Tnp_IS630 (pfam01710), mob_myst_A (TIGR02612)

Seq: BLXO01000013.1 Candidatus Regiella insecticola Tut DNA, Contig13_2573_1157_3, whole genome shotgun sequence (16928 bp)
Overview 1 RT 1: 9200-15792 bp Neighborhood of RT #1 [9200, 15833] PAS_4 HTH_LUXR RVT-GII group_II_RT_mat RVT-GII GIIM DUF1640 DUF1640 KilA-N Feature: gene Location: 9200-9925 bp Feature: domain Description: PAS_4 Location: 9269-9590 bp Feature: domain Description: PAS_4 Location: 9269-9590 bp Feature: domain Description: HTH_LUXR Location: 9671-9830 bp Feature: domain Description: HTH_LUXR Location: 967 1-9830 bp Feature: gene Location: 10024-10170 bp Feature: gene Location: 11303-11560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11309-11558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11309-11558 bp Feature: gene Location: 11778-12104 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11787-12084 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 117 87 -12084 bp Feature: gene Location: 12186-12383 bp Feature: gene Location: 12844-14148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13129-13765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13129-137 65 bp Feature: domain Description: GIIM Note: maturase Location: 13840-14056 bp Feature: domain Description: GIIM Note: maturase Location: 13840-14056 bp Feature: gene Location: 14555-14962 bp Feature: domain Description: DUF1640 Location: 14573-14657 bp Feature: domain Description: DUF1640 Location: 1457 3-14657 bp Feature: domain Description: DUF1640 Location: 14684-14951 bp Feature: domain Description: DUF1640 Location: 14684-14951 bp Feature: gene Location: 15639-15833 bp Feature: domain Description: KilA-N Location: 15675-15792 bp Feature: domain Description: KilA-N Location: 1567 5-157 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAS_4 (pfam08448), HTH_LUXR (smart00421), RVT-GII, group_II_RT_mat (TIGR04416), GIIM (pfam08388), DUF1640 (pfam07798), KilA-N (pfam04383)

Seq: BLXO01000014.1 Candidatus Regiella insecticola Tut DNA, Contig14_2571_1157_1, whole genome shotgun sequence (12491 bp)
Overview 1 RT 1: 3767-8196 bp Neighborhood of RT #1 [3767, 8291] KilA-N DUF1640 RVT-GII Sigma70_r4_2 PAS_4 HTH_LUXR Feature: gene Location: 3767-3961 bp Feature: domain Description: KilA-N Location: 3803-3920 bp Feature: domain Description: KilA-N Location: 38 03-3920 bp Feature: gene Location: 4638-5261 bp Feature: domain Description: DUF1640 Location: 4656-5250 bp Feature: domain Description: DUF1640 Location: 4656-5250 bp Feature: gene Location: 5380-5646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5386-5596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538 6-5596 bp Feature: gene Location: 6419-6673 bp Feature: domain Description: Sigma70_r4_2 Location: 6455-6599 bp Feature: domain Description: Sigma70_r4_2 Location: 6455-6599 bp Feature: gene Location: 7566-8291 bp Feature: domain Description: PAS_4 Location: 7635-7956 bp Feature: domain Description: PAS_4 Location: 7635-7956 bp Feature: domain Description: HTH_LUXR Location: 8037-8196 bp Feature: domain Description: HTH_LUXR Location: 8 037-8 196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KilA-N (pfam04383), DUF1640 (pfam07798), RVT-GII, Sigma70_r4_2 (pfam08281), PAS_4 (pfam08448), HTH_LUXR (smart00421)