myRT

myRT report for GCA_013374425.1_ASM1337442v1

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Seq: QBUP01000048.1 Methanophagales archaeon isolate Agg-C03 AggC03_190, whole genome shotgun sequence (3719 bp)
Overview 1 RT 1: 1635-3497 bp Neighborhood of RT #1 [1635, 3718] PRK07027 RVT-GII GIIM Feature: gene Location: 1635-1766 bp Feature: gene Location: 2313-2693 bp Feature: domain Description: PRK07027 Location: 2328-2688 bp Feature: domain Description: PRK07027 Location: 2328-2688 bp Feature: gene Location: 2867-3718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876-3212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876-321 2 bp Feature: domain Description: GIIM Note: maturase Location: 3269-3497 bp Feature: domain Description: GIIM Note: maturase Location: 3269-3497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07027 (cobalamin biosynthesis protein CbiG; Provisional), RVT-GII, GIIM (pfam08388)

Seq: QBUP01000049.1 Methanophagales archaeon isolate Agg-C03 AggC03_195, whole genome shotgun sequence (5041 bp)
Overview 1 RT 1: 621-4942 bp Neighborhood of RT #1 [621, 5040] RVT-GII DDE_Tnp_IS66 DDE_Tnp_1 Feature: gene Location: 621-752 bp Feature: gene Location: 1350-1631 bp Feature: gene Location: 1628-3358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1961-2153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1961-2 153 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2453-3041 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 453-3041 bp Feature: gene Location: 3342-3491 bp Feature: gene Location: 3964-5040 bp Feature: domain Description: DDE_Tnp_1 Location: 4531-4942 bp Feature: domain Description: DDE_Tnp_1 Location: 4531-4942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_1 (pfam01609)

Seq: QBUP01000115.1 Methanophagales archaeon isolate Agg-C03 AggC03_203, whole genome shotgun sequence (8821 bp)
Overview 1 RT 1: 2260-6820 bp Neighborhood of RT #1 [2260, 6828] Response_reg RVT-GII AtoC PRK11360 PRK11360 Feature: gene Location: 2260-2553 bp Feature: domain Description: Response_reg Location: 2269-2530 bp Feature: domain Description: Response_reg Location: 2269-253 0 bp Feature: gene Location: 2713-3108 bp Feature: gene Location: 3105-4436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3384-4071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 84-4071 bp Feature: gene Location: 4497-5009 bp Feature: domain Description: AtoC Location: 4503-4923 bp Feature: domain Description: AtoC Location: 4503 -4923 bp Feature: gene Location: 5053-6828 bp Feature: domain Description: PRK11360 Location: 5356-5767 bp Feature: domain Description: PRK113 60 Location: 53 56-5767 bp Feature: domain Description: PRK11360 Location: 5791-6820 bp Feature: domain Description: PRK113 60 Location: 5791-6820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Response_reg (pfam00072), RVT-GII, AtoC (COG2204), PRK11360 (two-component system sensor histidine kinase AtoS)

Seq: QBUP01000307.1 Methanophagales archaeon isolate Agg-C03 AggC03_271, whole genome shotgun sequence (2338 bp)
Overview 1 RT 1: 127-2336 bp Neighborhood of RT #1 [127, 2336] RVT-GII GIIM Feature: gene Location: 127-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193-853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193-853 bp Feature: domain Description: GIIM Note: maturase Location: 913-1138 bp Feature: domain Description: GIIM Note: maturase Location: 913-1138 bp Feature: gene Location: 1780-2055 bp Feature: gene Location: 2175-2336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QBUP01000226.1 Methanophagales archaeon isolate Agg-C03 AggC03_313, whole genome shotgun sequence (2019 bp)
Overview 1 RT 1: 23-1803 bp Neighborhood of RT #1 [23, 1973] RVT_N RVT-GII GIIM Feature: gene Location: 23-511 bp Feature: gene Location: 498-1973 bp Feature: RT Description: RVT_N Location: 570-813 bp Feature: RT Description: RVT_N Location: 5 70-813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 858-1518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 8-15 18 bp Feature: domain Description: GIIM Note: maturase Location: 1575-1803 bp Feature: domain Description: GIIM Note: maturase Location: 15 75 -1803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QBUP01000188.1 Methanophagales archaeon isolate Agg-C03 AggC03_331, whole genome shotgun sequence (7397 bp)
Overview 1 RT 1: 2427-7396 bp Neighborhood of RT #1 [2427, 7396] YgiQ Elp3 COG3576 RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 2427-3539 bp Feature: domain Description: YgiQ Location: 2439-2613 bp Feature: domain Description: YgiQ Location: 2439-26 13 bp Feature: domain Description: Elp3 Location: 2640-3267 bp Feature: domain Description: Elp3 Location: 26 40-326 7 bp Feature: gene Location: 3616-4017 bp Feature: domain Description: COG3576 Location: 3637-4012 bp Feature: domain Description: COG3576 Location: 36 37-4012 bp Feature: gene Location: 4109-5443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310-4967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310-496 7 bp Feature: domain Description: GIIM Note: maturase Location: 5048-5279 bp Feature: domain Description: GIIM Note: maturase Location: 5048-5279 bp Feature: gene Location: 5554-5808 bp Feature: gene Location: 5881-6852 bp Feature: RT Description: RVT_N Location: 5971-6211 bp Feature: RT Description: RVT_N Location: 5971-6 211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6259-6778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 259-6 778 bp Feature: gene Location: 7088-7396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YgiQ (COG1032), Elp3 (smart00729), COG3576 (Predicted flavin-nucleotide-binding protein, pyridoxine 5'-phosphate oxidase superfamily ), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)