myRT

myRT report for GCA_013374525.1_ASM1337452v1

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Seq: QENI01000167.1 ANME-2 cluster archaeon isolate CONS3730E01UFb2 Ga0123269_1329, whole genome shotgun sequence (6614 bp)
Overview 1 RT 1: 3249-6558 bp Neighborhood of RT #1 [3249, 6611] RVT_N RVT-GII GIIM HTH_29 Feature: gene Location: 3249-3629 bp Feature: gene Location: 3965-4201 bp Feature: gene Location: 4216-5766 bp Feature: domain Description: RVT_N Location: 4285-4528 bp Feature: domain Description: RVT_N Location: 4285-4528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4573-5221 bp Feature: domain Description: GIIM Note: maturase Location: 5275-5506 bp Feature: domain Description: GIIM Note: maturase Location: 5275-5506 bp Feature: gene Location: 6040-6279 bp Feature: gene Location: 6351-6611 bp Feature: domain Description: HTH_29 Location: 6375-6558 bp Feature: domain Description: HTH_29 Location: 6375-6558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_29 (pfam13551)

Seq: QENI01000162.1 ANME-2 cluster archaeon isolate CONS3730E01UFb2 Ga0123269_1354, whole genome shotgun sequence (6242 bp)
Overview 1 RT 1: 3-2362 bp Neighborhood of RT #1 [3, 2362] RVT-CRISPR-like Feature: gene Location: 3-494 bp Feature: gene Location: 501-1733 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 750-1368 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 750-1368 bp Feature: gene Location: 1827-2027 bp Feature: gene Location: 2207-2362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: QENI01000066.1 ANME-2 cluster archaeon isolate CONS3730E01UFb2 Ga0123269_1438, whole genome shotgun sequence (4915 bp)
Overview 1 RT 1: 42-3902 bp Neighborhood of RT #1 [42, 3902] COG5421 RVT-GII Feature: gene Location: 42-1352 bp Feature: domain Description: COG5421 Location: 48-1329 bp Feature: domain Description: COG5421 Location: 48-13 29 bp Feature: gene Location: 1935-2627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1959-2262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1959-2262 bp Feature: gene Location: 3057-3203 bp Feature: gene Location: 3288-3902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-GII

Seq: QENI01000096.1 ANME-2 cluster archaeon isolate CONS3730E01UFb2 Ga0123269_1533, whole genome shotgun sequence (3699 bp)
Overview 1 RT 1: 2-3511 bp Neighborhood of RT #1 [2, 3552] RVT-GII TPR TPR COG4951 Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 2-136 bp Feature: gene Location: 255-2252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270-699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270-699 bp Feature: domain Description: TPR Location: 849-1077 bp Feature: domain Description: TPR Location: 84 9-1077 bp Feature: domain Description: TPR Location: 1134-1287 bp Feature: domain Description: TPR Location: 1134 -1287 bp Feature: domain Description: COG4951 Location: 1377-2061 bp Feature: domain Description: COG4 951 Location: 1377-2061 bp Feature: gene Location: 2287-3276 bp Feature: domain Description: Cas1_I-II-III Location: 2296-3241 bp Feature: domain Description: Cas1_I-II-III Location: 2296-324 1 bp Feature: gene Location: 3280-3552 bp Feature: domain Description: Cas2_I_II_III Location: 3289-3511 bp Feature: domain Description: Cas2_I_II_III Location: 3289-3511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TPR (smart00028), COG4951 (Uncharacterized protein ), Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)