myRT

myRT report for GCA_013374725.1_ASM1337472v1

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Seq: JAAEYL010000020.1 Pseudomonas syringae pv. actinidiae strain MAFF 613017 Psa1-613017_contig_20, whole genome shotgun sequence (1912 bp)
Overview 1 RT 1: 1-1614 bp Neighborhood of RT #1 [1, 1787] RVT-GII GIIM Feature: gene Location: 1-279 bp Feature: gene Location: 504-1787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744-1359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 744-1 359 bp Feature: domain Description: GIIM Note: maturase Location: 1404-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1 404-1 61 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAEYL010000271.1 Pseudomonas syringae pv. actinidiae strain MAFF 613017 Psa1-613017_contig_271, whole genome shotgun sequence (1112 bp)
Overview 1 RT 1: 124-976 bp Neighborhood of RT #1 [124, 1110] RVT-GII GIIM Feature: gene Location: 124-1110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127-691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 7-691 bp Feature: domain Description: GIIM Note: maturase Location: 748-976 bp Feature: domain Description: GIIM Note: maturase Location: 748-976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAEYL010000287.1 Pseudomonas syringae pv. actinidiae strain MAFF 613017 Psa1-613017_contig_287, whole genome shotgun sequence (1808 bp)
Overview 1 RT 1: 1-1257 bp Neighborhood of RT #1 [1, 1775] DDE_3 RVT-Retrons Feature: gene Location: 1-273 bp Feature: domain Description: DDE_3 Location: 13-145 bp Feature: domain Description: DDE_3 Location: 13 -145 bp Feature: gene Location: 501-1775 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 630-1257 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63 0-1257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-Retrons

Seq: JAAEYL010000393.1 Pseudomonas syringae pv. actinidiae strain MAFF 613017 Psa1-613017_contig_393, whole genome shotgun sequence (861 bp)
Overview 1 RT 1: 1-400 bp Neighborhood of RT #1 [1, 399] RVT-GII Feature: gene Location: 1-399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334 -4 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAEYL010000071.1 Pseudomonas syringae pv. actinidiae strain MAFF 613017 Psa1-613017_contig_71, whole genome shotgun sequence (22351 bp)
Overview 1 RT 1: 1207-6508 bp Neighborhood of RT #1 [1207, 6508] RVT-UG15 SIRT5_Af1_CobB Feature: gene Location: 1207-1398 bp Feature: gene Location: 1589-1930 bp Feature: gene Location: 2760-4406 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 3207-3618 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 3207-3618 bp Feature: gene Location: 4687-5238 bp Feature: domain Description: SIRT5_Af1_CobB Location: 4741-5173 bp Feature: domain Description: SIRT5 _Af1_CobB Location: 4741-5 173 bp Feature: gene Location: 5321-6508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, SIRT5_Af1_CobB (cd01412)