myRT

myRT report for GCA_013377095.1_ASM1337709v1

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Seq: JACAAY010000170.1 Desulfuromonadales bacterium isolate Cfx2-04 MAG4_170, whole genome shotgun sequence (6556 bp)
Overview 1 RT 1: 2263-6516 bp Neighborhood of RT #1 [2263, 6516] RVT-GII HAF_rpt HAF_rpt HAF_rpt HAF_rpt HAF_rpt HAF_rpt HAF_rpt Feature: gene Location: 2263-2412 bp Feature: gene Location: 2603-2932 bp Feature: gene Location: 3284-3892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3314-3500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 4-3500 bp Feature: gene Location: 4405-5697 bp Feature: domain Description: HAF_rpt Location: 4519-4627 bp Feature: domain Description: HAF_rpt Location: 451 9-4627 bp Feature: domain Description: HAF_rpt Location: 4645-4759 bp Feature: domain Description: HAF_rpt Location: 4645-4759 bp Feature: domain Description: HAF_rpt Location: 4777-4882 bp Feature: domain Description: HAF_rpt Location: 4777-4882 bp Feature: domain Description: HAF_rpt Location: 4921-5032 bp Feature: domain Description: HAF_rpt Location: 4921 -5032 bp Feature: domain Description: HAF_rpt Location: 5059-5170 bp Feature: domain Description: HAF_rpt Location: 5059-51 70 bp Feature: domain Description: HAF_rpt Location: 5194-5296 bp Feature: domain Description: HAF_rpt Location: 51 94-5296 bp Feature: domain Description: HAF_rpt Location: 5329-5413 bp Feature: domain Description: HAF_rpt Location: 5329-541 3 bp Feature: gene Location: 6151-6516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HAF_rpt (TIGR02913)

Seq: JACAAY010000002.1 Desulfuromonadales bacterium isolate Cfx2-04 MAG4_2, whole genome shotgun sequence (119416 bp)
Overview 1 RT 1: 92464-97396 bp Neighborhood of RT #1 [92464, 97396] MdlB tolA_full DUF3108 RVT-GII GIIM Feature: gene Location: 92464-94236 bp Feature: domain Description: MdlB Location: 92515-94213 bp Feature: domain Description: MdlB Location: 92 515-942 13 bp Feature: gene Location: 94247-95407 bp Feature: domain Description: tolA_full Location: 94289-94580 bp Feature: domain Description: tolA_full Location: 942 89-94580 bp Feature: domain Description: DUF3108 Location: 94661-95363 bp Feature: domain Description: DUF3108 Location: 94661-95363 bp Feature: gene Location: 95518-96921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95857-96472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95857-96472 bp Feature: domain Description: GIIM Note: maturase Location: 96526-96736 bp Feature: domain Description: GIIM Note: maturase Location: 9652 6-96736 bp Feature: gene Location: 96984-97121 bp Feature: gene Location: 97166-97396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MdlB (COG1132), tolA_full (TIGR02794), DUF3108 (pfam11306), RVT-GII, GIIM (pfam08388)

Seq: JACAAY010000213.1 Desulfuromonadales bacterium isolate Cfx2-04 MAG4_213, whole genome shotgun sequence (3629 bp)
Overview 1 RT 1: 1622-3609 bp Neighborhood of RT #1 [1622, 3626] AbiEii COG5340 RVT-GII Feature: gene Location: 1622-2506 bp Feature: domain Description: AbiEii Location: 1721-2402 bp Feature: domain Description: AbiEii Location: 1721-2402 bp Feature: gene Location: 2509-3162 bp Feature: domain Description: COG5340 Location: 2599-2806 bp Feature: domain Description: COG53 40 Location: 2599-2806 bp Feature: gene Location: 3378-3626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3381-3609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 81-3 609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-GII