myRT

myRT report for GCA_013377585.1_ASM1337758v1

Download annotations/find similar RTs

Seq: JABXXL010000005.1 Bacillus thuringiensis serovar kurstaki strain KNU-25 000000F_arrow, whole genome shotgun sequence (2907954 bp)
Overview 1 RT 1: 13924-17613 bp 2 RT 2: 481482-485818 bp 3 RT 3: 935189-939419 bp 4 RT 4: 1125487-1131831 bp 5 RT 5: 1141106-1144883 bp 6 RT 6: 1469261-1473771 bp Neighborhood of RT #1 [13924, 17613] DDE_Tnp_1 RVT-GII GIIM Neighborhood of RT #2 [481482, 485820] Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL Neighborhood of RT #3 [935189, 939433] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #4 [1125487, 1131860] Uup Uup HATPase_BceS-YxdK-YvcQ-like RVT-GII HNHc OmpR Neighborhood of RT #5 [1141106, 1144897] RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #6 [1469261, 1473785] COG4584 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 13924-14994 bp Feature: domain Description: DDE_Tnp_1 Location: 14293-14980 bp Feature: domain Description: DDE_Tnp_1 Location: 1 4293-1 4980 bp Feature: gene Location: 15146-15325 bp Feature: gene Location: 15475-16806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15784-16420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5784-1 6420 bp Feature: domain Description: GIIM Note: maturase Location: 16498-16723 bp Feature: domain Description: GIIM Note: maturase Location: 1 6498-1 6723 bp Feature: gene Location: 17031-17342 bp Feature: gene Location: 17350-17613 bp Feature: gene Location: 481482-481616 bp Feature: gene Location: 481837-482418 bp Feature: domain Description: Lysozyme_like Location: 481972-482407 bp Feature: domain Description: Lysozyme_like Location: 481 972-482407 bp Feature: gene Location: 482994-484817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483258-484092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483258-484092 bp Feature: domain Description: Intron_maturas2 Location: 484161-484500 bp Feature: domain Description: Intron_maturas2 Location: 4841 61 -484500 bp Feature: domain Description: HNHc Note: nucleases Location: 484638-484794 bp Feature: domain Description: HNHc Note: nucleases Location: 484638-484794 bp Feature: gene Location: 484819-484950 bp Feature: gene Location: 485314-485820 bp Feature: domain Description: RimL Location: 485323-485818 bp Feature: domain Description: RimL Location: 485323-48581 8 bp Feature: gene Location: 935189-935932 bp Feature: gene Location: 936015-936326 bp Feature: gene Location: 936551-937882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 936860-937496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 936860-937496 bp Feature: domain Description: GIIM Note: maturase Location: 937574-937799 bp Feature: domain Description: GIIM Note: maturase Location: 937574-937799 bp Feature: gene Location: 938032-938211 bp Feature: gene Location: 938363-939433 bp Feature: domain Description: DDE_Tnp_1 Location: 938732-939419 bp Feature: domain Description: DDE_Tnp_1 Location: 938732-93941 9 bp Feature: gene Location: 1125487-1127133 bp Feature: domain Description: Uup Location: 1125514-1125745 bp Feature: domain Description: Uup Location: 1 1 2551 4-1 1 25745 bp Feature: domain Description: Uup Location: 1125760-1126969 bp Feature: domain Description: Uup Location: 1 1 25760-1 1 26969 bp Feature: gene Location: 1127567-1128232 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 1127897-1128221 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 1 1 27897-1 1 28221 bp Feature: gene Location: 1128426-1130195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1128684-1129380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 28684-1 1 29380 bp Feature: domain Description: HNHc Note: nucleases Location: 1129941-1130079 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 29941 -1 1 30079 bp Feature: gene Location: 1130905-1131156 bp Feature: gene Location: 1131153-1131860 bp Feature: domain Description: OmpR Location: 1131162-1131831 bp Feature: domain Description: OmpR Location: 1 1 31 1 62-1 1 31 831 bp Feature: gene Location: 1141106-1141249 bp Feature: gene Location: 1141479-1141790 bp Feature: gene Location: 1142015-1143346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1142324-1142960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 42324-1 1 42960 bp Feature: domain Description: GIIM Note: maturase Location: 1143038-1143263 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 43038-1 1 43263 bp Feature: gene Location: 1143496-1143675 bp Feature: gene Location: 1143827-1144897 bp Feature: domain Description: DDE_Tnp_1 Location: 1144196-1144883 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 441 96-1 1 44883 bp Feature: gene Location: 1469261-1470256 bp Feature: domain Description: COG4584 Location: 1469723-1470113 bp Feature: domain Description: COG4584 Location: 1 469723-1 4701 1 3 bp Feature: gene Location: 1470367-1470678 bp Feature: gene Location: 1470903-1472234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1471212-1471848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 471 21 2-1 471 848 bp Feature: domain Description: GIIM Note: maturase Location: 1471926-1472151 bp Feature: domain Description: GIIM Note: maturase Location: 1 471 926-1 4721 51 bp Feature: gene Location: 1472384-1472563 bp Feature: gene Location: 1472715-1473785 bp Feature: domain Description: DDE_Tnp_1 Location: 1473084-1473771 bp Feature: domain Description: DDE_Tnp_1 Location: 1 473084-1 473771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), Lysozyme_like (pfam13702), Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670), Uup (COG0488), HATPase_BceS-YxdK-YvcQ-like (cd16948), OmpR (COG0745)
COG4584 (Transposase )