myRT

myRT report for GCA_013377675.1_ASM1337767v1

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Seq: JABXWN010000038.1 Clostridium butyricum strain HYCB NODE_38_length_31692_cov_44.102614, whole genome shotgun sequence (31692 bp)
Overview 1 RT 1: 7452-16060 bp Neighborhood of RT #1 [7452, 16071] RVT-Retrons ADA MarR Feature: gene Location: 7452-10388 bp Feature: gene Location: 10388-12196 bp Feature: gene Location: 12193-13701 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12829-13477 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2829-1 3477 bp Feature: gene Location: 14289-15281 bp Feature: domain Description: ADA Location: 14304-15273 bp Feature: domain Description: ADA Location: 1 4304-1 5273 bp Feature: gene Location: 15628-16071 bp Feature: domain Description: MarR Location: 15685-16060 bp Feature: domain Description: MarR Location: 1 5685-1 6060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ADA (cd01320), MarR (pfam01047)

Seq: JABXWN010000059.1 Clostridium butyricum strain HYCB NODE_59_length_2686_cov_163.809301, whole genome shotgun sequence (2686 bp)
Overview 1 RT 1: 750-2451 bp Neighborhood of RT #1 [750, 2561] RVT-GII HNHc Feature: gene Location: 750-2561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068-1764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068-1764 bp Feature: domain Description: HNHc Note: nucleases Location: 2313-2451 bp Feature: domain Description: HNHc Note: nucleases Location: 2 313-2 451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JABXWN010000005.1 Clostridium butyricum strain HYCB NODE_5_length_245888_cov_35.127034, whole genome shotgun sequence (245888 bp)
Overview 1 RT 1: 117062-124211 bp Neighborhood of RT #1 [117062, 124213] PadR RVT-UG24 YdiU Feature: gene Location: 117062-117604 bp Feature: domain Description: PadR Location: 117086-117461 bp Feature: domain Description: PadR Location: 117086-117461 bp Feature: gene Location: 117681-117890 bp Feature: gene Location: 118306-121566 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 118813-119293 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 118813 -119293 bp Feature: gene Location: 121556-122128 bp Feature: gene Location: 122738-124213 bp Feature: domain Description: YdiU Location: 122768-124211 bp Feature: domain Description: YdiU Location: 122768-124211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-UG24, YdiU (COG0397)