myRT

myRT report for GCA_013378445.1_ASM1337844v1

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Seq: JABXYK010000028.1 Rhizobium sp. DBTS2 ZB100027, whole genome shotgun sequence (41079 bp)
Overview 1 RT 1: 2525-14983 bp Neighborhood of RT #1 [2525, 14991] Phd DUF1612 HTH_13 RVT-UG11 RES Phage_terminase DUF2384 RVT-UG20 COG3440 Feature: gene Location: 2525-2815 bp Feature: domain Description: Phd Location: 2549-2669 bp Feature: domain Description: Phd Location: 2549-2669 bp Feature: gene Location: 3005-4138 bp Feature: domain Description: DUF1612 Location: 3572-3950 bp Feature: domain Description: DUF1 61 2 Location: 3572-3950 bp Feature: domain Description: HTH_13 Location: 3977-4136 bp Feature: domain Description: HTH_1 3 Location: 3977-41 36 bp Feature: gene Location: 4639-5433 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4777-5212 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 4777-521 2 bp Feature: gene Location: 5440-7023 bp Feature: gene Location: 7100-7675 bp Feature: domain Description: RES Location: 7184-7640 bp Feature: domain Description: RES Location: 71 84-7640 bp Feature: gene Location: 7679-8017 bp Feature: domain Description: Phage_terminase Location: 7724-7802 bp Feature: domain Description: Phage_terminase Location: 7724-7802 bp Feature: domain Description: DUF2384 Location: 7883-8000 bp Feature: domain Description: DUF2384 Location: 7883-8000 bp Feature: gene Location: 8023-9534 bp Feature: gene Location: 9748-11388 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 10129-10627 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 1 01 29-1 0627 bp Feature: gene Location: 11573-13921 bp Feature: gene Location: 14080-14991 bp Feature: domain Description: COG3440 Location: 14572-14983 bp Feature: domain Description: COG3440 Location: 1 4572-1 4983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phd (COG4118), DUF1612 (pfam07756), HTH_13 (pfam11972), RVT-UG11, RES (smart00953), Phage_terminase (pfam10668), DUF2384 (pfam09722), RVT-UG20, COG3440 (Predicted restriction endonuclease )