myRT

myRT report for GCA_013385305.1_ASM1338530v1

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Seq: JACAQG010000012.1 Pseudomonas agarici strain IPO3740 IPO_3740_S25_L002_contig_12, whole genome shotgun sequence (288330 bp)
Overview 1 RT 1: 148122-150144 bp 2 RT 2: 170488-176996 bp Neighborhood of RT #1 [148122, 150144] RVT-Retrons Neighborhood of RT #2 [170488, 177019] COG4951 SSL2 RVT-UG2 HTH_28 LysR Feature: gene Location: 148122-148319 bp Feature: gene Location: 148451-148705 bp Feature: gene Location: 148781-149650 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148916-149486 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4891 6-1 49486 bp Feature: gene Location: 149675-149833 bp Feature: gene Location: 149845-150144 bp Feature: gene Location: 170488-172986 bp Feature: domain Description: COG4951 Location: 170605-171745 bp Feature: domain Description: COG4951 Location: 1 70605-1 71 745 bp Feature: domain Description: SSL2 Location: 171823-172933 bp Feature: domain Description: SSL2 Location: 1 71 823-1 72933 bp Feature: gene Location: 173009-173164 bp Feature: gene Location: 173625-174902 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 173817-174603 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 7381 7-1 74603 bp Feature: gene Location: 175352-176038 bp Feature: domain Description: HTH_28 Location: 175361-175457 bp Feature: domain Description: HTH_28 Location: 1 75361 -1 75457 bp Feature: gene Location: 176132-177019 bp Feature: domain Description: LysR Location: 176138-176996 bp Feature: domain Description: LysR Location: 1 761 38-1 76996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG4951 (Uncharacterized protein ), SSL2 (COG1061), RVT-UG2, HTH_28 (pfam13518), LysR (COG0583)

Seq: JACAQG010000034.1 Pseudomonas agarici strain IPO3740 IPO_3740_S25_L002_contig_35, whole genome shotgun sequence (106510 bp)
Overview 1 RT 1: 63321-68790 bp Neighborhood of RT #1 [63321, 68790] PRK05408 INT_Rci_Hp1_C RVT-Retrons Feature: gene Location: 63321-63593 bp Feature: domain Description: PRK05408 Location: 63324-63588 bp Feature: domain Description: PRK05408 Location: 6332 4-63588 bp Feature: gene Location: 63869-64987 bp Feature: domain Description: INT_Rci_Hp1_C Location: 64406-64910 bp Feature: domain Description: INT_Rci_Hp1_C Location: 64406-64910 bp Feature: gene Location: 65210-66946 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65384-65981 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 65384-65981 bp Feature: gene Location: 67468-67695 bp Feature: gene Location: 68638-68790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05408 (oxidative damage protection protein; Provisional), INT_Rci_Hp1_C (cd00796), RVT-Retrons