myRT

myRT report for GCA_013385405.1_ASM1338540v1

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Seq: JACAQB010000024.1 Pseudomonas gingeri strain H7001 run0228_H7001_S5_L004_contig_24, whole genome shotgun sequence (217799 bp)
Overview 1 RT 1: 190510-194447 bp Neighborhood of RT #1 [190510, 194500] HTH_ARAC MhpC RVT-GII group_II_RT_mat GltP Feature: gene Location: 190510-191367 bp Feature: domain Description: HTH_ARAC Location: 191122-191365 bp Feature: domain Description: HTH_ARAC Location: 1 91 1 22-1 91 365 bp Feature: gene Location: 191389-191730 bp Feature: domain Description: MhpC Location: 191515-191722 bp Feature: domain Description: MhpC Location: 1 91 51 5-1 91 722 bp Feature: gene Location: 191846-192217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191852-192194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 852-1 921 94 bp Feature: gene Location: 192367-192693 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 192484-192688 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 92484-1 92688 bp Feature: gene Location: 193196-194500 bp Feature: domain Description: GltP Location: 193220-194447 bp Feature: domain Description: GltP Location: 1 93220-1 94447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARAC (smart00342), MhpC (COG0596), RVT-GII, group_II_RT_mat (TIGR04416), GltP (COG1301)

Seq: JACAQB010000008.1 Pseudomonas gingeri strain H7001 run0228_H7001_S5_L004_contig_8, whole genome shotgun sequence (887250 bp)
Overview 1 RT 1: 47543-52879 bp Neighborhood of RT #1 [47543, 52879] STKc_PknB_like RVT-G2L4 Feature: gene Location: 47543-48574 bp Feature: domain Description: STKc_PknB_like Location: 47579-48335 bp Feature: domain Description: STKc_PknB_like Location: 47579-48335 bp Feature: gene Location: 48574-49134 bp Feature: gene Location: 49174-50436 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 49393-49978 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 49393-49978 bp Feature: gene Location: 50498-50692 bp Feature: gene Location: 52592-52879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-G2L4