myRT

myRT report for GCA_013386695.1_ASM1338669v1

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Seq: JACARI010000044.1 Pseudomonas yamanorum strain J3002 J3002_S26_L001_contig_44, whole genome shotgun sequence (339617 bp)
Overview 1 RT 1: 151445-158086 bp 2 RT 2: 163114-167971 bp Neighborhood of RT #1 [151445, 158094] PRK07056 RhtB RVT_N RVT-GII GIIM PRK07487 Neighborhood of RT #2 [163114, 167994] SnoaL_4 AraC_N GlxA RVT-GII Resolvase Recombinase SDR_c Feature: gene Location: 151445-152803 bp Feature: domain Description: PRK07056 Location: 151469-152795 bp Feature: domain Description: PRK07056 Location: 1 51 469-1 52795 bp Feature: gene Location: 153139-153729 bp Feature: domain Description: RhtB Location: 153160-153724 bp Feature: domain Description: RhtB Location: 1 531 60-1 53724 bp Feature: gene Location: 154523-156028 bp Feature: RT Description: RVT_N Location: 154601-154835 bp Feature: RT Description: RVT_N Location: 1 54601 -1 54835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154880-155522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 54880-1 55522 bp Feature: domain Description: GIIM Note: maturase Location: 155573-155807 bp Feature: domain Description: GIIM Note: maturase Location: 1 55573-1 55807 bp Feature: gene Location: 156069-156674 bp Feature: gene Location: 156685-158094 bp Feature: domain Description: PRK07487 Location: 156697-158086 bp Feature: domain Description: PRK07487 Location: 1 56697-1 58086 bp Feature: gene Location: 163114-163584 bp Feature: domain Description: SnoaL_4 Location: 163147-163513 bp Feature: domain Description: SnoaL_4 Location: 1 631 47-1 6351 3 bp Feature: gene Location: 163747-164613 bp Feature: domain Description: AraC_N Location: 163813-164260 bp Feature: domain Description: AraC_N Location: 1 6381 3-1 64260 bp Feature: domain Description: GlxA Location: 164290-164593 bp Feature: domain Description: GlxA Location: 1 64290-1 64593 bp Feature: gene Location: 165274-165954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165538-165931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 65538-1 65931 bp Feature: gene Location: 166247-167095 bp Feature: domain Description: Resolvase Location: 166268-166706 bp Feature: domain Description: Resolvase Location: 1 66268-1 66706 bp Feature: domain Description: Recombinase Location: 166802-167021 bp Feature: domain Description: Recombinase Location: 1 66802-1 67021 bp Feature: gene Location: 167230-167994 bp Feature: domain Description: SDR_c Location: 167257-167971 bp Feature: domain Description: SDR_c Location: 1 67257-1 67971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07056 (amidase; Provisional), RhtB (COG1280), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK07487 (amidase; Provisional), SnoaL_4 (pfam13577), AraC_N (pfam06719), GlxA (COG4977), Resolvase (smart00857)
Recombinase (pfam07508), SDR_c (cd05233)