myRT

myRT report for GCA_013386835.1_ASM1338683v1

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Seq: JACAQY010000049.1 Pseudomonas sp. IPO3774 IPO_3774_S43_L003_contig_49, whole genome shotgun sequence (47150 bp)
Overview 1 RT 1: 30174-34185 bp 2 RT 2: 38172-44150 bp Neighborhood of RT #1 [30174, 34185] TAS_TAS_TAS_TIGR02293 TAS_TAS_TAS_TIGR02293 RVT-UG12 Neighborhood of RT #2 [38172, 44158] YdeI HemolysinCabind HemolysinCabind RVT-GII COG3046 MvaT_DBD Feature: gene Location: 30174-31478 bp Feature: gene Location: 31678-32001 bp Feature: domain Description: TAS_TAS_TAS_TIGR02293 Location: 31738-31828 bp Feature: domain Description: TAS_TAS_TAS_TIGR02293 Location: 31 738-31 828 bp Feature: domain Description: TAS_TAS_TAS_TIGR02293 Location: 31834-31957 bp Feature: domain Description: TAS_TAS_TAS_TIGR02293 Location: 31 834-31 957 bp Feature: gene Location: 32019-33293 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 32022-32382 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 32022-32382 bp Feature: gene Location: 33630-33866 bp Feature: gene Location: 33868-34185 bp Feature: gene Location: 38172-38522 bp Feature: domain Description: YdeI Location: 38235-38517 bp Feature: domain Description: YdeI Location: 38235-3851 7 bp Feature: gene Location: 39189-40898 bp Feature: domain Description: HemolysinCabind Location: 40134-40224 bp Feature: domain Description: HemolysinCabind Location: 401 34-40224 bp Feature: domain Description: HemolysinCabind Location: 40566-40650 bp Feature: domain Description: HemolysinCabind Location: 40566-40650 bp Feature: gene Location: 41303-43075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41987-42683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 987-42683 bp Feature: gene Location: 43183-43611 bp Feature: domain Description: COG3046 Location: 43186-43594 bp Feature: domain Description: COG3046 Location: 431 86-43594 bp Feature: gene Location: 43793-44158 bp Feature: domain Description: MvaT_DBD Location: 44030-44150 bp Feature: domain Description: MvaT_DBD Location: 44030-441 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TAS_TAS_TAS_TIGR02293, RVT-UG12, YdeI (COG4430), HemolysinCabind (pfam00353), RVT-GII, COG3046 (Uncharacterized protein related to deoxyribodipyrimidine photolyase ), MvaT_DBD (cl40688)