myRT

myRT report for GCA_013390945.1_ASM1339094v1

Download annotations/find similar RTs

Seq: JACAUC010000130.1 Chloroflexi bacterium isolate L227-5C MAG2_130, whole genome shotgun sequence (15243 bp)
Overview 1 RT 1: 11396-15171 bp Neighborhood of RT #1 [11396, 15171] pfam03781 Avd_like RVT-DGRs Feature: gene Location: 11396-13111 bp Feature: domain Description: pfam03781 Location: 12392-13061 bp Feature: domain Description: pfam03781 Location: 1 2392-1 3061 bp Feature: gene Location: 13284-13649 bp Feature: domain Description: Avd_like Location: 13320-13629 bp Feature: domain Description: Avd_like Location: 1 3320-1 3629 bp Feature: gene Location: 13669-14793 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13825-14473 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 3825-1 4473 bp Feature: gene Location: 14929-15171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs

Seq: JACAUC010000175.1 Chloroflexi bacterium isolate L227-5C MAG2_176, whole genome shotgun sequence (12596 bp)
Overview 1 RT 1: 5779-12295 bp Neighborhood of RT #1 [5779, 12295] GT4_MtfB-like N6_N4_Mtase group_II_RT_mat RVT-UG19 GT4_PimA-like Feature: gene Location: 5779-6978 bp Feature: domain Description: GT4_MtfB-like Location: 5959-6934 bp Feature: domain Description: GT4_MtfB-like Location: 5959-6934 bp Feature: gene Location: 6999-8351 bp Feature: domain Description: N6_N4_Mtase Location: 7263-8121 bp Feature: domain Description: N6_N4_Mtase Location: 72 63-812 1 bp Feature: gene Location: 8544-10643 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8577-8859 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8577-8859 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 8904-9396 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 8904-9396 bp Feature: gene Location: 10953-12047 bp Feature: domain Description: GT4_PimA-like Location: 10995-12012 bp Feature: domain Description: GT4_PimA-like Location: 10995-12 012 bp Feature: gene Location: 12071-12295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_MtfB-like (cd03809), N6_N4_Mtase (pfam01555), group_II_RT_mat (TIGR04416), RVT-UG19, GT4_PimA-like (cd03801)

Seq: JACAUC010000296.1 Chloroflexi bacterium isolate L227-5C MAG2_297, whole genome shotgun sequence (6877 bp)
Overview 1 RT 1: 160-3303 bp Neighborhood of RT #1 [160, 3303] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 160-414 bp Feature: gene Location: 639-2474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1719 bp Feature: domain Description: Intron_maturas2 Location: 1827-2082 bp Feature: domain Description: Intron_maturas2 Location: 1827-2082 bp Feature: domain Description: HNHc Note: nucleases Location: 2259-2412 bp Feature: domain Description: HNHc Note: nucleases Location: 2259-2412 bp Feature: gene Location: 2753-2920 bp Feature: gene Location: 3100-3303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JACAUC010000299.1 Chloroflexi bacterium isolate L227-5C MAG2_300, whole genome shotgun sequence (6853 bp)
Overview 1 RT 1: 1446-6820 bp Neighborhood of RT #1 [1446, 6852] HTH_17 dinD RVT-GII Intron_maturas2 HNHc EXOIII dinD Feature: gene Location: 1446-1676 bp Feature: domain Description: HTH_17 Location: 1473-1617 bp Feature: domain Description: HTH_17 Location: 14 73-1617 bp Feature: gene Location: 2707-3024 bp Feature: domain Description: dinD Location: 2710-2935 bp Feature: domain Description: dinD Location: 2710-2935 bp Feature: gene Location: 3391-5244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3673-4471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3673-4 4 71 bp Feature: domain Description: Intron_maturas2 Location: 4615-4828 bp Feature: domain Description: Intron_maturas2 Location: 4 615-4 828 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5164 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5164 bp Feature: gene Location: 5555-5683 bp Feature: gene Location: 5764-6852 bp Feature: domain Description: EXOIII Location: 5863-6235 bp Feature: domain Description: EXOIII Location: 5863-6235 bp Feature: domain Description: dinD Location: 6556-6820 bp Feature: domain Description: dinD Location: 6556-6820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), dinD (PRK11525), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), EXOIII (smart00479)

Seq: JACAUC010000337.1 Chloroflexi bacterium isolate L227-5C MAG2_338, whole genome shotgun sequence (5453 bp)
Overview 1 RT 1: 864-5380 bp Neighborhood of RT #1 [864, 5380] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR RVT-CRISPR Feature: gene Location: 864-1148 bp Feature: domain Description: Cas2_I_II_III Location: 873-1104 bp Feature: domain Description: Cas2_I_II_III Location: 873-1104 bp Feature: gene Location: 1448-2491 bp Feature: domain Description: Cas1_I-II-III Location: 1463-2456 bp Feature: domain Description: Cas1_I-II-III Location: 1463-245 6 bp Feature: gene Location: 2689-4476 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3070-3388 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3070-3388 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4039-4294 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4039-4294 bp Feature: gene Location: 4581-4982 bp Feature: gene Location: 5225-5380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR

Seq: JACAUC010000393.1 Chloroflexi bacterium isolate L227-5C MAG2_396, whole genome shotgun sequence (3681 bp)
Overview 1 RT 1: 13-3419 bp Neighborhood of RT #1 [13, 3598] RVT_N RVT-GII GIIM HNHc InsA Feature: gene Location: 13-801 bp Feature: gene Location: 856-2772 bp Feature: domain Description: RVT_N Location: 1108-1351 bp Feature: domain Description: RVT_N Location: 1108-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1396-2050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1396 -2050 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2335 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2335 bp Feature: domain Description: HNHc Note: nucleases Location: 2560-2719 bp Feature: domain Description: HNHc Note: nucleases Location: 256 0-2719 bp Feature: gene Location: 3086-3598 bp Feature: domain Description: InsA Location: 3137-3419 bp Feature: domain Description: InsA Location: 3137-3419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsA (COG3677)

Seq: JACAUC010000417.1 Chloroflexi bacterium isolate L227-5C MAG2_422, whole genome shotgun sequence (3312 bp)
Overview 1 RT 1: 3-3254 bp Neighborhood of RT #1 [3, 3254] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3-191 bp Feature: gene Location: 252-2120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519-1326 bp Feature: domain Description: Intron_maturas2 Location: 1431-1734 bp Feature: domain Description: Intron_maturas2 Location: 1431-17 34 bp Feature: domain Description: HNHc Note: nucleases Location: 1896-2055 bp Feature: domain Description: HNHc Note: nucleases Location: 1896-2055 bp Feature: gene Location: 2304-3254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)