myRT

myRT report for GCA_013390985.1_ASM1339098v1

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Seq: JACASN010000042.1 Acinetobacter sp. Swhac1 Scaffold42, whole genome shotgun sequence (13329 bp)
Overview 1 RT 1: 9339-13308 bp Neighborhood of RT #1 [9339, 13328] DDE_Tnp_IS66_C RVT-GII GIIM HNH RVT_N RVT-GII zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 9339-9701 bp Feature: gene Location: 9832-10050 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9916-10027 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 991 6-1 0027 bp Feature: gene Location: 10164-11078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10200-10386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0200-1 0386 bp Feature: domain Description: GIIM Note: maturase Location: 10440-10671 bp Feature: domain Description: GIIM Note: maturase Location: 1 0440-1 0671 bp Feature: domain Description: HNH Note: nucleases Location: 10923-11040 bp Feature: domain Description: HNH Note: nucleases Location: 1 0923-1 1 040 bp Feature: gene Location: 11056-11841 bp Feature: RT Description: RVT_N Location: 11116-11359 bp Feature: RT Description: RVT_N Location: 1 1 1 1 6-1 1 359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11404-11782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 404-1 1 782 bp Feature: gene Location: 11869-12048 bp Feature: gene Location: 12381-13328 bp Feature: domain Description: zf-IS66 Location: 12384-12474 bp Feature: domain Description: zf-IS66 Location: 1 2384-1 2474 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12516-13308 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 251 6-1 3308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844), RVT_N (pfam13655), DDE_Tnp_IS66_C (pfam13817), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: JACASN010000081.1 Acinetobacter sp. Swhac1 Scaffold81, whole genome shotgun sequence (2212 bp)
Overview 1 RT 1: 1-2189 bp Neighborhood of RT #1 [1, 2209] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-243 bp Feature: domain Description: PHA02517 Location: 28-244 bp Feature: domain Description: PHA02 517 Location: 2 8-2 44 bp Feature: gene Location: 296-1537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494-1151 bp Feature: domain Description: GIIM Note: maturase Location: 1229-1460 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 9-1460 bp Feature: gene Location: 2030-2209 bp Feature: domain Description: PHA02517 Location: 2033-2189 bp Feature: domain Description: PHA02 517 Location: 2 033-2 189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)