myRT

myRT report for GCA_013391025.1_ASM1339102v1

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Seq: JACASJ010000170.1 Enterobacter sp. SECR19-1250 Scaffold_170, whole genome shotgun sequence (5997 bp)
Overview 1 RT 1: 51-4310 bp Neighborhood of RT #1 [51, 4312] RVT-GII GIIM PRK15399 PRK11478 Feature: gene Location: 51-212 bp Feature: gene Location: 291-1583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552-1 1 67 bp Feature: domain Description: GIIM Note: maturase Location: 1221-1425 bp Feature: domain Description: GIIM Note: maturase Location: 1 221 -1 425 bp Feature: gene Location: 1725-3857 bp Feature: domain Description: PRK15399 Location: 1728-3855 bp Feature: domain Description: PRK1 5399 Location: 1 728-3855 bp Feature: gene Location: 3923-4312 bp Feature: domain Description: PRK11478 Location: 3926-4310 bp Feature: domain Description: PRK1 1 478 Location: 3926-431 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15399 (lysine decarboxylase), RVT-GII, GIIM (pfam08388)

Seq: JACASJ010000178.1 Enterobacter sp. SECR19-1250 Scaffold_178, whole genome shotgun sequence (5405 bp)
Overview 1 RT 1: 364-4446 bp Neighborhood of RT #1 [364, 4511] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 364-1446 bp Feature: domain Description: COG3547 Location: 409-1375 bp Feature: domain Description: COG3547 Location: 409-1375 bp Feature: gene Location: 1566-1709 bp Feature: gene Location: 1986-3509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2259-2991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 59-2 991 bp Feature: domain Description: GIIM Note: maturase Location: 3066-3264 bp Feature: domain Description: GIIM Note: maturase Location: 3066-32 64 bp Feature: gene Location: 3463-3888 bp Feature: gene Location: 4101-4511 bp Feature: domain Description: PHA02517 Location: 4107-4446 bp Feature: domain Description: PHA02 517 Location: 4107-4446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: JACASJ010000025.1 Enterobacter sp. SECR19-1250 Scaffold_25, whole genome shotgun sequence (54452 bp)
Overview 1 RT 1: 12053-16335 bp Neighborhood of RT #1 [12053, 16358] ArdC RVT-GII LysR Feature: gene Location: 12053-13018 bp Feature: domain Description: ArdC Location: 12179-13013 bp Feature: domain Description: ArdC Location: 12179-13 013 bp Feature: gene Location: 13150-13419 bp Feature: gene Location: 13488-14975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13893-14583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 893 -14583 bp Feature: gene Location: 15129-15368 bp Feature: gene Location: 15471-16358 bp Feature: domain Description: LysR Location: 15483-16335 bp Feature: domain Description: LysR Location: 15483 -163 3 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, LysR (COG0583)

Seq: JACASJ010000091.1 Enterobacter sp. SECR19-1250 Scaffold_91, whole genome shotgun sequence (20807 bp)
Overview 1 RT 1: 9865-13786 bp Neighborhood of RT #1 [9865, 13786] umuC RVT_N RVT-GII GIIM HNHc Feature: gene Location: 9865-11136 bp Feature: domain Description: umuC Location: 9868-11128 bp Feature: domain Description: umuC Location: 9868-11128 bp Feature: gene Location: 11157-11462 bp Feature: gene Location: 11536-13251 bp Feature: RT Description: RVT_N Location: 11590-11833 bp Feature: RT Description: RVT_N Location: 11590-11833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11878-12529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11878-12529 bp Feature: domain Description: GIIM Note: maturase Location: 12583-12814 bp Feature: domain Description: GIIM Note: maturase Location: 12583-12814 bp Feature: domain Description: HNHc Note: nucleases Location: 13048-13204 bp Feature: domain Description: HNHc Note: nucleases Location: 1304 8-13204 bp Feature: gene Location: 13304-13480 bp Feature: gene Location: 13616-13786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), umuC (PRK03609)