myRT

myRT report for GCA_013391365.1_ASM1339136v1

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Seq: JACAWZ010000001.1 Ralstonia pickettii strain LB_tupeA Ralstonia_pickettii_LB_tupeA_Contig-01_872658bp, whole genome shotgun sequence (872658 bp)
Overview 1 RT 1: 150313-156403 bp 2 RT 2: 716843-724435 bp Neighborhood of RT #1 [150313, 156405] MetK RVT_N RVT-GII GIIM HNHc PRK08905 PRK06946 Neighborhood of RT #2 [716843, 724435] PRK13800 RVT-UG1 Feature: gene Location: 150313-151545 bp Feature: domain Description: MetK Location: 150364-151510 bp Feature: domain Description: MetK Location: 1 50364-1 51 51 0 bp Feature: gene Location: 152469-152597 bp Feature: gene Location: 152779-154476 bp Feature: domain Description: RVT_N Location: 152836-153079 bp Feature: domain Description: RVT_N Location: 1 52836-1 53079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153124-153772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 531 24-1 53772 bp Feature: domain Description: GIIM Note: maturase Location: 153823-154057 bp Feature: domain Description: GIIM Note: maturase Location: 1 53823-1 54057 bp Feature: domain Description: HNHc Note: nucleases Location: 154276-154441 bp Feature: domain Description: HNHc Note: nucleases Location: 1 54276-1 54441 bp Feature: gene Location: 154650-155498 bp Feature: domain Description: PRK08905 Location: 154653-155493 bp Feature: domain Description: PRK08905 Location: 1 54653-1 55493 bp Feature: gene Location: 155512-156405 bp Feature: domain Description: PRK06946 Location: 155515-156403 bp Feature: domain Description: PRK06946 Location: 1 5551 5-1 56403 bp Feature: gene Location: 716843-717532 bp Feature: gene Location: 717620-719023 bp Feature: domain Description: PRK13800 Location: 717779-718580 bp Feature: domain Description: PRK1 3800 Location: 71 7779-71 8580 bp Feature: gene Location: 719152-723168 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 719881-720394 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 71 9881 -720394 bp Feature: gene Location: 723179-723784 bp Feature: gene Location: 723911-724435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MetK (COG0192), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK08905 (lysophospholipid acyltransferase family protein), PRK06946 (lipid A biosynthesis lauroyl acyltransferase; Provisional), PRK13800 (fumarate reductase/succinate dehydrogenase flavoprotein subunit), RVT-UG1

Seq: JACAWZ010000003.1 Ralstonia pickettii strain LB_tupeA Ralstonia_pickettii_LB_tupeA_Contig-03_811124bp, whole genome shotgun sequence (811124 bp)
Overview 1 RT 1: 619136-625620 bp Neighborhood of RT #1 [619136, 625829] PRK07053 IMPase RVT_N RVT-GII GIIM HNHc TrmJ CysE Feature: gene Location: 619136-619840 bp Feature: domain Description: PRK07053 Location: 619139-619832 bp Feature: domain Description: PRK07053 Location: 619139-619832 bp Feature: gene Location: 620044-620856 bp Feature: domain Description: IMPase Location: 620056-620791 bp Feature: domain Description: IMPase Location: 62 0056-62 0791 bp Feature: gene Location: 621057-622769 bp Feature: domain Description: RVT_N Location: 621114-621357 bp Feature: domain Description: RVT_N Location: 62 1114-62 1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 621402-622050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 1402 -62 2 050 bp Feature: domain Description: GIIM Note: maturase Location: 622101-622335 bp Feature: domain Description: GIIM Note: maturase Location: 62 2 101-62 2 335 bp Feature: domain Description: HNHc Note: nucleases Location: 622554-622719 bp Feature: domain Description: HNHc Note: nucleases Location: 62 2 554-62 2 719 bp Feature: gene Location: 624036-624935 bp Feature: domain Description: TrmJ Location: 624147-624888 bp Feature: domain Description: TrmJ Location: 62 4147-62 4888 bp Feature: gene Location: 625083-625829 bp Feature: domain Description: CysE Location: 625092-625620 bp Feature: domain Description: CysE Location: 62 5092 -62 562 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07053 (glutamine amidotransferase; Provisional), IMPase (cd01639), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), TrmJ (COG0565), CysE (COG1045)

Seq: JACAWZ010000007.1 Ralstonia pickettii strain LB_tupeA Ralstonia_pickettii_LB_tupeA_Contig-07-223349bp, whole genome shotgun sequence (223349 bp)
Overview 1 RT 1: 1-3583 bp Neighborhood of RT #1 [1, 3588] RVT-GII GIIM HNHc AdoHcyase YvlD Feature: gene Location: 1-1482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124-772 bp Feature: domain Description: GIIM Note: maturase Location: 826-1057 bp Feature: domain Description: GIIM Note: maturase Location: 826-1057 bp Feature: domain Description: HNHc Note: nucleases Location: 1276-1441 bp Feature: domain Description: HNHc Note: nucleases Location: 1276-1441 bp Feature: gene Location: 1764-3188 bp Feature: domain Description: AdoHcyase Location: 1803-3183 bp Feature: domain Description: AdoHcyase Location: 1803 -3 183 bp Feature: gene Location: 3244-3588 bp Feature: domain Description: YvlD Location: 3247-3583 bp Feature: domain Description: YvlD Location: 3 247-3 583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), AdoHcyase (smart00996), YvlD (COG1950)