myRT

myRT report for GCA_013393545.1_ASM1339354v1

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Seq: JABXHG010000222.1 Alteromonadaceae bacterium isolate KG8 Alt_gnl_C_L_222, whole genome shotgun sequence (2969 bp)
Overview 1 RT 1: 3-2830 bp Neighborhood of RT #1 [3, 2949] RVT-GII GIIM HTH_Tnp_1 Feature: gene Location: 3-197 bp Feature: gene Location: 241-519 bp Feature: gene Location: 588-1934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-1500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-1 500 bp Feature: domain Description: GIIM Note: maturase Location: 1548-1770 bp Feature: domain Description: GIIM Note: maturase Location: 1 548-1 770 bp Feature: gene Location: 2020-2517 bp Feature: gene Location: 2602-2949 bp Feature: domain Description: HTH_Tnp_1 Location: 2629-2830 bp Feature: domain Description: HTH_Tnp_1 Location: 2629-2830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527)

Seq: JABXHG010000048.1 Alteromonadaceae bacterium isolate KG8 Alt_gnl_C_L_48, whole genome shotgun sequence (3272 bp)
Overview 1 RT 1: 257-2893 bp Neighborhood of RT #1 [257, 2893] PHA02517 RVT-GII GIIM Feature: gene Location: 257-400 bp Feature: gene Location: 592-834 bp Feature: domain Description: PHA02517 Location: 598-808 bp Feature: domain Description: PHA02 517 Location: 598-808 bp Feature: gene Location: 1032-2486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1305-2037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1305-2 037 bp Feature: domain Description: GIIM Note: maturase Location: 2148-2337 bp Feature: domain Description: GIIM Note: maturase Location: 2 148-2 337 bp Feature: gene Location: 2483-2632 bp Feature: gene Location: 2747-2893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JABXHG010000515.1 Alteromonadaceae bacterium isolate KG8 Alt_gnl_C_L_516, whole genome shotgun sequence (6448 bp)
Overview 1 RT 1: 3420-5797 bp Neighborhood of RT #1 [3420, 6297] SLATT_5 RVT-UG17 Feature: gene Location: 3420-3893 bp Feature: gene Location: 4373-4969 bp Feature: domain Description: SLATT_5 Location: 4385-4949 bp Feature: domain Description: SLATT_5 Location: 43 85-4949 bp Feature: gene Location: 4966-6297 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5194-5797 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5194-5797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: JABXHG010000009.1 Alteromonadaceae bacterium isolate KG8 Alt_gnl_C_L_9, whole genome shotgun sequence (26756 bp)
Overview 1 RT 1: 13517-19905 bp Neighborhood of RT #1 [13517, 19916] GltS_FMN BCCT RVT-GII GIIM rimK_rel_E_lig Feature: gene Location: 13517-15160 bp Feature: domain Description: GltS_FMN Location: 13730-14981 bp Feature: domain Description: GltS_FMN Location: 13730-14 981 bp Feature: gene Location: 15344-16936 bp Feature: domain Description: BCCT Location: 15437-16898 bp Feature: domain Description: BCCT Location: 154 37-16898 bp Feature: gene Location: 17457-18644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17781-18399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17781-18399 bp Feature: domain Description: GIIM Note: maturase Location: 18450-18642 bp Feature: domain Description: GIIM Note: maturase Location: 184 50-1864 2 bp Feature: gene Location: 18675-18848 bp Feature: gene Location: 18969-19916 bp Feature: domain Description: rimK_rel_E_lig Location: 18981-19905 bp Feature: domain Description: rimK_rel_E_lig Location: 18981-19905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GltS_FMN (cd02808), BCCT (pfam02028), RVT-GII, GIIM (pfam08388), rimK_rel_E_lig (TIGR02291)

Seq: JABXHG010000096.1 Alteromonadaceae bacterium isolate KG8 Alt_gnl_C_L_96, whole genome shotgun sequence (1561 bp)
Overview 1 RT 1: 3-1268 bp Neighborhood of RT #1 [3, 1357] RVT-GII GIIM Feature: gene Location: 3-134 bp Feature: gene Location: 212-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314-971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314-971 bp Feature: domain Description: GIIM Note: maturase Location: 1052-1268 bp Feature: domain Description: GIIM Note: maturase Location: 105 2-1268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)