myRT

myRT report for GCA_013395195.1_ASM1339519v1

Download annotations/find similar RTs

Seq: JAAFAS010000037.1 Escherichia coli strain ZH142R-B NODE_37_length_42184_cov_222.987698, whole genome shotgun sequence (42184 bp)
Overview 1 RT 1: 6120-12075 bp Neighborhood of RT #1 [6120, 12075] PBP2_CrgA_like_5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 6120-6530 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 6192-6504 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 61 92-6504 bp Feature: gene Location: 6731-6871 bp Feature: gene Location: 7137-9155 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 7713-8163 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 771 3-81 63 bp Feature: gene Location: 9146-10507 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 9518-10013 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 951 8-1 001 3 bp Feature: gene Location: 11042-11314 bp Feature: domain Description: PRK09678 Location: 11051-11207 bp Feature: domain Description: PRK09678 Location: 1 1 051 -1 1 207 bp Feature: gene Location: 11314-12075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_CrgA_like_5 (cd08474), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JAAFAS010000052.1 Escherichia coli strain ZH142R-B NODE_52_length_31510_cov_181.256291, whole genome shotgun sequence (31510 bp)
Overview 1 RT 1: 4706-8345 bp Neighborhood of RT #1 [4706, 8512] InsE PHA02517 RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 4706-5008 bp Feature: domain Description: InsE Location: 4745-4994 bp Feature: domain Description: InsE Location: 4745-4994 bp Feature: gene Location: 5064-5489 bp Feature: domain Description: PHA02517 Location: 5088-5424 bp Feature: domain Description: PHA02 517 Location: 5088-542 4 bp Feature: gene Location: 6081-7604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6354-7086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6354-7086 bp Feature: domain Description: GIIM Note: maturase Location: 7161-7359 bp Feature: domain Description: GIIM Note: maturase Location: 7161-7359 bp Feature: gene Location: 7757-7933 bp Feature: domain Description: PHA02517 Location: 7760-7862 bp Feature: domain Description: PHA02 517 Location: 7760-7862 bp Feature: gene Location: 8099-8512 bp Feature: domain Description: COG2085 Location: 8198-8345 bp Feature: domain Description: COG2 085 Location: 8198-8345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )