myRT

myRT report for GCA_013395355.1_ASM1339535v1

Download annotations/find similar RTs

Seq: JAAFAZ010000034.1 Escherichia coli strain BS68R-1-D NODE_34_length_42228_cov_180.155394, whole genome shotgun sequence (42228 bp)
Overview 1 RT 1: 30163-36083 bp Neighborhood of RT #1 [30163, 36109] PRK09678 RVT-UG3 RVT-UG8 PBP2_CrgA_like_5 Feature: gene Location: 30163-30924 bp Feature: gene Location: 30924-31196 bp Feature: domain Description: PRK09678 Location: 30933-31089 bp Feature: domain Description: PRK09678 Location: 30933-31 089 bp Feature: gene Location: 31731-33092 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 32103-32598 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 321 03-32598 bp Feature: gene Location: 33083-35101 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 33659-34109 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 33659-341 09 bp Feature: gene Location: 35294-35464 bp Feature: gene Location: 35699-36109 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 35771-36083 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 35771 -36083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PBP2_CrgA_like_5 (cd08474)

Seq: JAAFAZ010000052.1 Escherichia coli strain BS68R-1-D NODE_52_length_31510_cov_149.594662, whole genome shotgun sequence (31510 bp)
Overview 1 RT 1: 4706-8345 bp Neighborhood of RT #1 [4706, 8512] InsE PHA02517 RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 4706-5008 bp Feature: domain Description: InsE Location: 4745-4994 bp Feature: domain Description: InsE Location: 4745-4994 bp Feature: gene Location: 5064-5489 bp Feature: domain Description: PHA02517 Location: 5088-5424 bp Feature: domain Description: PHA02 517 Location: 5088-542 4 bp Feature: gene Location: 6081-7604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6354-7086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6354-7086 bp Feature: domain Description: GIIM Note: maturase Location: 7161-7359 bp Feature: domain Description: GIIM Note: maturase Location: 7161-7359 bp Feature: gene Location: 7757-7933 bp Feature: domain Description: PHA02517 Location: 7760-7862 bp Feature: domain Description: PHA02 517 Location: 7760-7862 bp Feature: gene Location: 8099-8512 bp Feature: domain Description: COG2085 Location: 8198-8345 bp Feature: domain Description: COG2 085 Location: 8198-8345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )