myRT

myRT report for GCA_013395465.1_ASM1339546v1

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Seq: JAAFBG010000035.1 Escherichia coli strain BS24R-2-A NODE_35_length_36080_cov_164.317529, whole genome shotgun sequence (36080 bp)
Overview 1 RT 1: 17342-21625 bp Neighborhood of RT #1 [17342, 21633] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 17342-18247 bp Feature: gene Location: 18505-18702 bp Feature: gene Location: 18733-19272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19063-19141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9063-1 91 41 bp Feature: gene Location: 19300-19821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19306-19588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9306-1 9588 bp Feature: domain Description: GIIM Note: maturase Location: 19636-19816 bp Feature: domain Description: GIIM Note: maturase Location: 1 9636-1 981 6 bp Feature: gene Location: 20143-20331 bp Feature: gene Location: 20371-21633 bp Feature: domain Description: YesM Location: 20884-21625 bp Feature: domain Description: YesM Location: 20884-21 625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JAAFBG010000004.1 Escherichia coli strain BS24R-2-A NODE_4_length_264847_cov_169.567153, whole genome shotgun sequence (264847 bp)
Overview 1 RT 1: 259766-262731 bp Neighborhood of RT #1 [259766, 262928] SLATT_5 RVT-UG17 DUF4094 Peptidase_S74 Feature: gene Location: 259766-259906 bp Feature: gene Location: 259919-260470 bp Feature: domain Description: SLATT_5 Location: 259925-260441 bp Feature: domain Description: SLATT_5 Location: 2 5992 5-2 60441 bp Feature: gene Location: 260448-261818 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 260676-261282 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 60676-2 612 82 bp Feature: gene Location: 261926-262213 bp Feature: gene Location: 262224-262928 bp Feature: domain Description: DUF4094 Location: 262266-262356 bp Feature: domain Description: DUF4094 Location: 2 62 2 66-2 62 356 bp Feature: domain Description: Peptidase_S74 Location: 262572-262731 bp Feature: domain Description: Peptidase_S74 Location: 2 62 572 -2 62 731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, DUF4094 (pfam13334), Peptidase_S74 (pfam13884)

Seq: JAAFBG010000066.1 Escherichia coli strain BS24R-2-A NODE_66_length_5451_cov_146.076665, whole genome shotgun sequence (5451 bp)
Overview 1 RT 1: 842-5450 bp Neighborhood of RT #1 [842, 5449] RVT-GII GIIM PAAR_1 Feature: gene Location: 842-1747 bp Feature: gene Location: 1760-2425 bp Feature: gene Location: 2869-4368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3322-3979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 22-3 979 bp Feature: domain Description: GIIM Note: maturase Location: 4069-4276 bp Feature: domain Description: GIIM Note: maturase Location: 4069-4276 bp Feature: gene Location: 4756-4998 bp Feature: gene Location: 5042-5449 bp Feature: domain Description: PAAR_1 Location: 5234-5450 bp Feature: domain Description: PAAR_1 Location: 523 4-5450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PAAR_1 (cd14737)