myRT

myRT report for GCA_013395655.1_ASM1339565v1

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Seq: JAAFBO010000002.1 Escherichia coli strain ZH55R-A NODE_2_length_559852_cov_248.522601, whole genome shotgun sequence (559852 bp)
Overview 1 RT 1: 342498-347648 bp Neighborhood of RT #1 [342498, 347839] RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 342498-343496 bp Feature: gene Location: 343752-343910 bp Feature: gene Location: 344494-345537 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 344707-345304 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 344707-345304 bp Feature: gene Location: 345534-347189 bp Feature: domain Description: COG3950 Location: 345735-347157 bp Feature: domain Description: COG3950 Location: 345735-3471 57 bp Feature: gene Location: 347192-347839 bp Feature: domain Description: TIGR02646 Location: 347261-347648 bp Feature: domain Description: TIGR02646 Location: 347261 -347648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JAAFBO010000003.1 Escherichia coli strain ZH55R-A NODE_3_length_365022_cov_222.284613, whole genome shotgun sequence (365022 bp)
Overview 1 RT 1: 291315-295650 bp Neighborhood of RT #1 [291315, 295652] PRK11611 PRK05015 RVT-GII GIIM PRK10721 Feature: gene Location: 291315-292091 bp Feature: domain Description: PRK11611 Location: 291348-292080 bp Feature: domain Description: PRK11611 Location: 2 91348-2 92 080 bp Feature: gene Location: 292210-293493 bp Feature: domain Description: PRK05015 Location: 292225-293488 bp Feature: domain Description: PRK05015 Location: 2 92 2 2 5-2 93488 bp Feature: gene Location: 293592-294980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293922-294540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9392 2 -2 94540 bp Feature: domain Description: GIIM Note: maturase Location: 294588-294819 bp Feature: domain Description: GIIM Note: maturase Location: 2 94588-2 94819 bp Feature: gene Location: 295011-295208 bp Feature: gene Location: 295452-295652 bp Feature: domain Description: PRK10721 Location: 295455-295650 bp Feature: domain Description: PRK1072 1 Location: 2 95455-2 95650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11611 (enhanced serine sensitivity protein SseB; Provisional), PRK05015 (aminopeptidase B; Provisional), RVT-GII, GIIM (pfam08388), PRK10721 (hypothetical protein; Provisional)