myRT

myRT report for GCA_013401625.1_ASM1340162v1

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Seq: JACBIW010000053.1 Serratia fonticola strain UPMP2128 contig00053, whole genome shotgun sequence (17585 bp)
Overview 1 RT 1: 11621-14759 bp Neighborhood of RT #1 [11621, 14759] Tra5 RVT-GII RVT-GII Feature: gene Location: 11621-11806 bp Feature: domain Description: Tra5 Location: 11633-11804 bp Feature: domain Description: Tra5 Location: 1 1 633-1 1 804 bp Feature: gene Location: 12087-12260 bp Feature: gene Location: 12329-12916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12341-12758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2341 -1 2758 bp Feature: gene Location: 12955-13467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13228-13402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3228-1 3402 bp Feature: gene Location: 13667-13936 bp Feature: gene Location: 14325-14759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII

Seq: JACBIW010000068.1 Serratia fonticola strain UPMP2128 contig00068, whole genome shotgun sequence (6691 bp)
Overview 1 RT 1: 1596-5073 bp Neighborhood of RT #1 [1596, 5073] PRK15287 FimA RVT-UG4 Feature: gene Location: 1596-2081 bp Feature: domain Description: PRK15287 Location: 1623-2079 bp Feature: domain Description: PRK152 87 Location: 162 3-2 079 bp Feature: gene Location: 2091-2627 bp Feature: domain Description: FimA Location: 2121-2625 bp Feature: domain Description: FimA Location: 2 12 1-2 62 5 bp Feature: gene Location: 2652-3632 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3000-3441 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3000-3441 bp Feature: gene Location: 3668-4450 bp Feature: gene Location: 4666-5073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4

Seq: JACBIW010000070.1 Serratia fonticola strain UPMP2128 contig00070, whole genome shotgun sequence (6350 bp)
Overview 1 RT 1: 1596-5200 bp Neighborhood of RT #1 [1596, 5200] PRK15287 FimA RVT-UG4 Feature: gene Location: 1596-2081 bp Feature: domain Description: PRK15287 Location: 1623-2079 bp Feature: domain Description: PRK15287 Location: 1623 -2079 bp Feature: gene Location: 2088-2627 bp Feature: domain Description: FimA Location: 2121-2625 bp Feature: domain Description: FimA Location: 2121-2625 bp Feature: gene Location: 2652-3632 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3000-3441 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 000-3 441 bp Feature: gene Location: 3666-4466 bp Feature: gene Location: 4790-5200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4