myRT

myRT report for GCA_013401635.1_ASM1340163v1

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Seq: JACBIV010000049.1 Serratia fonticola strain UPMP2129 contig00049, whole genome shotgun sequence (18585 bp)
Overview 1 RT 1: 12583-15721 bp Neighborhood of RT #1 [12583, 15721] Tra5 RVT-GII RVT-GII Feature: gene Location: 12583-12768 bp Feature: domain Description: Tra5 Location: 12595-12766 bp Feature: domain Description: Tra5 Location: 1 2595-1 2766 bp Feature: gene Location: 13049-13222 bp Feature: gene Location: 13291-13878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13303-13720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3303-1 3720 bp Feature: gene Location: 13917-14429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14190-14364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 90-1 4364 bp Feature: gene Location: 14629-14898 bp Feature: gene Location: 15287-15721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII

Seq: JACBIV010000067.1 Serratia fonticola strain UPMP2129 contig00067, whole genome shotgun sequence (6591 bp)
Overview 1 RT 1: 1964-5441 bp Neighborhood of RT #1 [1964, 5441] PRK15287 FimA RVT-UG4 Feature: gene Location: 1964-2449 bp Feature: domain Description: PRK15287 Location: 1991-2447 bp Feature: domain Description: PRK152 87 Location: 1991-2 447 bp Feature: gene Location: 2459-2995 bp Feature: domain Description: FimA Location: 2489-2993 bp Feature: domain Description: FimA Location: 2 489-2 993 bp Feature: gene Location: 3020-4000 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3368-3809 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3368-3809 bp Feature: gene Location: 4036-4818 bp Feature: gene Location: 5034-5441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4

Seq: JACBIV010000069.1 Serratia fonticola strain UPMP2129 contig00069, whole genome shotgun sequence (6350 bp)
Overview 1 RT 1: 1596-5200 bp Neighborhood of RT #1 [1596, 5200] PRK15287 FimA RVT-UG4 Feature: gene Location: 1596-2081 bp Feature: domain Description: PRK15287 Location: 1623-2079 bp Feature: domain Description: PRK15287 Location: 1623 -2079 bp Feature: gene Location: 2088-2627 bp Feature: domain Description: FimA Location: 2121-2625 bp Feature: domain Description: FimA Location: 2121-2625 bp Feature: gene Location: 2652-3632 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3000-3441 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 000-3 441 bp Feature: gene Location: 3666-4466 bp Feature: gene Location: 4790-5200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4