myRT

myRT report for GCA_013407535.1_ASM1340753v1

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Seq: JACAZK010000001.1 Clostridium beijerinckii strain DJ031 Ga0423198_01, whole genome shotgun sequence (4823720 bp)
Overview 1 RT 1: 136786-143654 bp Neighborhood of RT #1 [136786, 143654] DDE_Tnp_IS66 RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like xerS INT_RitA_C_like RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 136786-137094 bp Feature: domain Description: DDE_Tnp_IS66 Location: 136852-137092 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 36852-1 37092 bp Feature: gene Location: 137618-137749 bp Feature: gene Location: 137861-138619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138230-138614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38230-1 3861 4 bp Feature: gene Location: 138728-139714 bp Feature: domain Description: Phage_int_SAM_1 Location: 138752-138998 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 38752-1 38998 bp Feature: domain Description: INT_RitC_C_like Location: 139079-139631 bp Feature: domain Description: INT_RitC_C_like Location: 1 39079-1 39631 bp Feature: gene Location: 139728-140708 bp Feature: domain Description: INT_RitB_C_like Location: 140064-140646 bp Feature: domain Description: INT_RitB_C_like Location: 1 40064-1 40646 bp Feature: gene Location: 140701-141948 bp Feature: domain Description: xerS Location: 141064-141178 bp Feature: domain Description: xerS Location: 1 41 064-1 41 1 78 bp Feature: domain Description: INT_RitA_C_like Location: 141373-141901 bp Feature: domain Description: INT_RitA_C_like Location: 1 41 373-1 41 901 bp Feature: gene Location: 142121-142780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142124-142331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 421 24-1 42331 bp Feature: domain Description: GIIM Note: maturase Location: 142388-142598 bp Feature: domain Description: GIIM Note: maturase Location: 1 42388-1 42598 bp Feature: gene Location: 142956-143273 bp Feature: domain Description: DDE_Tnp_IS66 Location: 142971-143079 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 42971 -1 43079 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 143100-143223 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 431 00-1 43223 bp Feature: gene Location: 143526-143654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), xerS (PRK05084), INT_RitA_C_like (cd01188), GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)