myRT

myRT report for GCA_013409845.1_ASM1340984v1

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Seq: JACCBR010000001.1 Paraburkholderia metrosideri strain M3D8B Ga0393949_01, whole genome shotgun sequence (4468034 bp)
Overview 1 RT 1: 3647182-3658119 bp Neighborhood of RT #1 [3647182, 3658169] Sigma70_r3 HTH_Hin_like HTH_23 HTH_23 HTH_23 RVT_N RVT-GII UvrA UvrA UvrA UvrA Feature: gene Location: 3647182-3647313 bp Feature: gene Location: 3647363-3650848 bp Feature: domain Description: Sigma70_r3 Location: 3649670-3649733 bp Feature: domain Description: Sigma70_r3 Location: 3649670-3649733 bp Feature: domain Description: HTH_Hin_like Location: 3649760-3649877 bp Feature: domain Description: HTH_Hin_like Location: 3649760-3649877 bp Feature: domain Description: HTH_23 Location: 3649937-3650039 bp Feature: domain Description: HTH_23 Location: 3649937-3650039 bp Feature: domain Description: HTH_23 Location: 3650093-3650174 bp Feature: domain Description: HTH_23 Location: 3650093-36501 74 bp Feature: domain Description: HTH_23 Location: 3650252-3650345 bp Feature: domain Description: HTH_23 Location: 3650252-3650345 bp Feature: gene Location: 3650870-3651544 bp Feature: domain Description: RVT_N Location: 3650918-3651161 bp Feature: domain Description: RVT_N Location: 365091 8-3651 1 61 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3651206-3651389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3651 206-3651 389 bp Feature: gene Location: 3651408-3652145 bp Feature: gene Location: 3652284-3658169 bp Feature: domain Description: UvrA Location: 3652299-3655236 bp Feature: domain Description: UvrA Location: 3652299-3655236 bp Feature: domain Description: UvrA Location: 3655338-3656256 bp Feature: domain Description: UvrA Location: 3655338-3656256 bp Feature: domain Description: UvrA Location: 3656313-3657153 bp Feature: domain Description: UvrA Location: 365631 3-36571 53 bp Feature: domain Description: UvrA Location: 3657237-3658119 bp Feature: domain Description: UvrA Location: 3657237-36581 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma70_r3 (pfam04539), HTH_Hin_like (cd00569), HTH_23 (pfam13384), RVT_N (pfam13655), RVT-GII, UvrA (COG0178)

Seq: JACCBR010000002.1 Paraburkholderia metrosideri strain M3D8B Ga0393949_02, whole genome shotgun sequence (3303382 bp)
Overview 1 RT 1: 640695-644878 bp Neighborhood of RT #1 [640695, 644878] MR_like GntR RVT-GII PBP1_ABC_LIVBP_like Feature: gene Location: 640695-641834 bp Feature: domain Description: MR_like Location: 640701-641778 bp Feature: domain Description: MR_like Location: 640701-641778 bp Feature: gene Location: 641902-642597 bp Feature: domain Description: GntR Location: 641929-642553 bp Feature: domain Description: GntR Location: 64192 9-642 553 bp Feature: gene Location: 642996-643433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643005-643212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 643005-6432 12 bp Feature: gene Location: 643551-644696 bp Feature: domain Description: PBP1_ABC_LIVBP_like Location: 643656-644664 bp Feature: domain Description: PBP1_ABC_LIVBP_like Location: 643656-644664 bp Feature: gene Location: 644744-644878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MR_like (cd03316), GntR (pfam00392), RVT-GII, PBP1_ABC_LIVBP_like

Seq: JACCBR010000003.1 Paraburkholderia metrosideri strain M3D8B Ga0393949_03, whole genome shotgun sequence (110673 bp)
Overview 1 RT 1: 91277-96401 bp Neighborhood of RT #1 [91277, 96448] dnaE2 RVT-Retrons AAA_21 AAA_21 DUF3268 Feature: gene Location: 91277-92521 bp Feature: domain Description: dnaE2 Location: 91283-92519 bp Feature: domain Description: dnaE2 Location: 91283 -92519 bp Feature: gene Location: 92568-92882 bp Feature: gene Location: 93391-94359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93517-94078 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93 517-94078 bp Feature: gene Location: 94356-95699 bp Feature: domain Description: AAA_21 Location: 94437-94587 bp Feature: domain Description: AAA_21 Location: 9443 7-94587 bp Feature: domain Description: AAA_21 Location: 94929-95100 bp Feature: domain Description: AAA_21 Location: 94929-95100 bp Feature: gene Location: 95990-96448 bp Feature: domain Description: DUF3268 Location: 96029-96401 bp Feature: domain Description: DUF3 268 Location: 96029-96401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE2 (PRK05672), RVT-Retrons, AAA_21 (pfam13304), DUF3268 (pfam11672)