myRT

myRT report for GCA_013411425.1_ASM1341142v1

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Seq: WRYK01000012.1 Salmonella enterica subsp. enterica serovar Typhimurium strain R2953 NODE_12_length_91818_cov_202.105555, whole genome shotgun sequence (91818 bp)
Overview 1 RT 1: 50160-53989 bp Neighborhood of RT #1 [50160, 54114] PRK13732 RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 50160-50390 bp Feature: domain Description: PRK13732 Location: 50163-50367 bp Feature: domain Description: PRK1 3732 Location: 501 63-50367 bp Feature: gene Location: 50511-50984 bp Feature: gene Location: 51558-53225 bp Feature: RT Description: RVT_N Location: 51606-51843 bp Feature: RT Description: RVT_N Location: 51 606-51 843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51894-52536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 894-52536 bp Feature: domain Description: GIIM Note: maturase Location: 52587-52821 bp Feature: domain Description: GIIM Note: maturase Location: 52587-52821 bp Feature: domain Description: HNHc Note: nucleases Location: 53031-53190 bp Feature: domain Description: HNHc Note: nucleases Location: 53031 -531 90 bp Feature: gene Location: 53338-53640 bp Feature: gene Location: 53692-54114 bp Feature: domain Description: DUF1380 Location: 53695-53989 bp Feature: domain Description: DUF1 380 Location: 53695-53989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: WRYK01000019.1 Salmonella enterica subsp. enterica serovar Typhimurium strain R2953 NODE_19_length_81328_cov_83.656934, whole genome shotgun sequence (81328 bp)
Overview 1 RT 1: 31797-36719 bp Neighborhood of RT #1 [31797, 36727] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31797-32516 bp Feature: domain Description: INT_P4_C Location: 31917-32445 bp Feature: domain Description: INT_P4_C Location: 31917-32 445 bp Feature: gene Location: 32841-33803 bp Feature: gene Location: 33803-34738 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33914-34499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33914-34499 bp Feature: gene Location: 34986-35195 bp Feature: gene Location: 35540-36727 bp Feature: domain Description: PRK10473 Location: 35543-36719 bp Feature: domain Description: PRK10473 Location: 35543-36719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)