myRT

myRT report for GCA_013411605.1_ASM1341160v1

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Seq: WRYU01000001.1 Salmonella enterica subsp. enterica serovar Typhimurium strain O446 NODE_1_length_424725_cov_79.676417, whole genome shotgun sequence (424725 bp)
Overview 1 RT 1: 355738-361863 bp Neighborhood of RT #1 [355738, 362045] PRK05658 PRK10201 RVT-UG11 5 Feature: gene Location: 355738-357720 bp Feature: domain Description: PRK05658 Location: 355876-357718 bp Feature: domain Description: PRK05658 Location: 355876-35771 8 bp Feature: gene Location: 357844-358350 bp Feature: domain Description: PRK10201 Location: 357847-358345 bp Feature: domain Description: PRK1 0201 Location: 357847-358345 bp Feature: gene Location: 358674-359438 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 358797-359250 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 358797-359250 bp Feature: gene Location: 360048-360215 bp Feature: gene Location: 360345-362045 bp Feature: domain Description: 5 Location: 361569-361863 bp Feature: domain Description: 5 Location: 361 569-361 863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, 5 (PHA02596)

Seq: WRYU01000026.1 Salmonella enterica subsp. enterica serovar Typhimurium strain O446 NODE_26_length_81304_cov_92.451095, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 31797-36722 bp Neighborhood of RT #1 [31797, 36730] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31797-32519 bp Feature: domain Description: INT_P4_C Location: 31917-32448 bp Feature: domain Description: INT_P4_C Location: 31917-32 448 bp Feature: gene Location: 32844-33806 bp Feature: gene Location: 33806-34741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: gene Location: 34989-35198 bp Feature: gene Location: 35543-36730 bp Feature: domain Description: PRK10473 Location: 35546-36722 bp Feature: domain Description: PRK10473 Location: 35546-3672 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)