myRT

myRT report for GCA_013411685.1_ASM1341168v1

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Seq: WRZA01000025.1 Salmonella enterica subsp. enterica serovar Typhimurium strain NP2490 NODE_25_length_81304_cov_86.560228, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 31797-36722 bp Neighborhood of RT #1 [31797, 36730] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31797-32519 bp Feature: domain Description: INT_P4_C Location: 31917-32448 bp Feature: domain Description: INT_P4_C Location: 31 91 7-32448 bp Feature: gene Location: 32844-33806 bp Feature: gene Location: 33806-34741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3391 7-34502 bp Feature: gene Location: 34989-35198 bp Feature: gene Location: 35543-36730 bp Feature: domain Description: PRK10473 Location: 35546-36722 bp Feature: domain Description: PRK1 0473 Location: 35546-36722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: WRZA01000004.1 Salmonella enterica subsp. enterica serovar Typhimurium strain NP2490 NODE_4_length_203759_cov_79.310784, whole genome shotgun sequence (203759 bp)
Overview 1 RT 1: 62062-68915 bp Neighborhood of RT #1 [62062, 68917] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 62062-62607 bp Feature: gene Location: 62610-64310 bp Feature: domain Description: 5 Location: 63834-64128 bp Feature: domain Description: 5 Location: 63834-6412 8 bp Feature: gene Location: 65217-65981 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 65340-65793 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 65340-65793 bp Feature: gene Location: 66305-66811 bp Feature: domain Description: PRK10201 Location: 66308-66806 bp Feature: domain Description: PRK102 01 Location: 66308-66806 bp Feature: gene Location: 66935-68917 bp Feature: domain Description: PRK05658 Location: 67073-68915 bp Feature: domain Description: PRK05658 Location: 67073-68915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)