myRT

myRT report for GCA_013411825.1_ASM1341182v1

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Seq: WRZD01000001.1 Salmonella enterica subsp. enterica serovar Typhimurium strain NP1242 NODE_1_length_535646_cov_68.206012, whole genome shotgun sequence (535646 bp)
Overview 1 RT 1: 166573-173426 bp Neighborhood of RT #1 [166573, 173428] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 166573-167118 bp Feature: gene Location: 167121-168821 bp Feature: domain Description: 5 Location: 168345-168639 bp Feature: domain Description: 5 Location: 1 68345-1 68639 bp Feature: gene Location: 169728-170492 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 169851-170304 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 69851 -1 70304 bp Feature: gene Location: 170816-171322 bp Feature: domain Description: PRK10201 Location: 170819-171317 bp Feature: domain Description: PRK1 0201 Location: 1 7081 9-1 71 31 7 bp Feature: gene Location: 171446-173428 bp Feature: domain Description: PRK05658 Location: 171584-173426 bp Feature: domain Description: PRK05658 Location: 1 71 584-1 73426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: WRZD01000024.1 Salmonella enterica subsp. enterica serovar Typhimurium strain NP1242 NODE_24_length_81304_cov_72.087226, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 31797-36722 bp Neighborhood of RT #1 [31797, 36730] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31797-32519 bp Feature: domain Description: INT_P4_C Location: 31917-32448 bp Feature: domain Description: INT_P4_C Location: 31917-32 448 bp Feature: gene Location: 32844-33806 bp Feature: gene Location: 33806-34741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: gene Location: 34989-35198 bp Feature: gene Location: 35543-36730 bp Feature: domain Description: PRK10473 Location: 35546-36722 bp Feature: domain Description: PRK10473 Location: 35546-3672 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)