myRT

myRT report for GCA_013411945.1_ASM1341194v1

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Seq: WRZJ01000010.1 Salmonella enterica subsp. enterica serovar Typhimurium strain CR516 NODE_10_length_128270_cov_108.747510, whole genome shotgun sequence (128270 bp)
Overview 1 RT 1: 62134-68987 bp Neighborhood of RT #1 [62134, 68989] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 62134-62679 bp Feature: gene Location: 62682-64382 bp Feature: domain Description: 5 Location: 63906-64200 bp Feature: domain Description: 5 Location: 63906-64200 bp Feature: gene Location: 65289-66053 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 65412-65865 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 6541 2-65865 bp Feature: gene Location: 66377-66883 bp Feature: domain Description: PRK10201 Location: 66380-66878 bp Feature: domain Description: PRK1 0201 Location: 66380-66878 bp Feature: gene Location: 67007-68989 bp Feature: domain Description: PRK05658 Location: 67145-68987 bp Feature: domain Description: PRK05658 Location: 671 45-68987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: WRZJ01000022.1 Salmonella enterica subsp. enterica serovar Typhimurium strain CR516 NODE_22_length_81304_cov_114.388756, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 44575-48751 bp Neighborhood of RT #1 [44575, 48751] PRK10473 RVT-Retrons Feature: gene Location: 44575-45762 bp Feature: domain Description: PRK10473 Location: 44578-45754 bp Feature: domain Description: PRK10473 Location: 44578-45754 bp Feature: gene Location: 46107-46316 bp Feature: gene Location: 46564-47499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46675-47260 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46675-472 60 bp Feature: gene Location: 47499-48461 bp Feature: gene Location: 48488-48751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons