myRT

myRT report for GCA_013411995.1_ASM1341199v1

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Seq: WRZN01000001.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B3497 NODE_1_length_578174_cov_88.718618, whole genome shotgun sequence (578174 bp)
Overview 1 RT 1: 166457-173310 bp Neighborhood of RT #1 [166457, 173312] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 166457-167002 bp Feature: gene Location: 167005-168705 bp Feature: domain Description: 5 Location: 168229-168523 bp Feature: domain Description: 5 Location: 1 68229-1 68523 bp Feature: gene Location: 169612-170376 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 169735-170188 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 69735-1 701 88 bp Feature: gene Location: 170700-171206 bp Feature: domain Description: PRK10201 Location: 170703-171201 bp Feature: domain Description: PRK1 0201 Location: 1 70703-1 71 201 bp Feature: gene Location: 171330-173312 bp Feature: domain Description: PRK05658 Location: 171468-173310 bp Feature: domain Description: PRK05658 Location: 1 71 468-1 7331 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: WRZN01000025.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B3497 NODE_25_length_81304_cov_94.646297, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 31797-36722 bp Neighborhood of RT #1 [31797, 36730] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31797-32519 bp Feature: domain Description: INT_P4_C Location: 31917-32448 bp Feature: domain Description: INT_P4_C Location: 31917-32 448 bp Feature: gene Location: 32844-33806 bp Feature: gene Location: 33806-34741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: gene Location: 34989-35198 bp Feature: gene Location: 35543-36730 bp Feature: domain Description: PRK10473 Location: 35546-36722 bp Feature: domain Description: PRK10473 Location: 35546-3672 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)