myRT

myRT report for GCA_013412105.1_ASM1341210v1

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Seq: WRZS01000001.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B4682 NODE_1_length_527400_cov_145.304378, whole genome shotgun sequence (527400 bp)
Overview 1 RT 1: 62178-69031 bp Neighborhood of RT #1 [62178, 69033] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 62178-62723 bp Feature: gene Location: 62726-64426 bp Feature: domain Description: 5 Location: 63950-64244 bp Feature: domain Description: 5 Location: 63950-64244 bp Feature: gene Location: 65333-66097 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 65456-65909 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 65456-65909 bp Feature: gene Location: 66421-66927 bp Feature: domain Description: PRK10201 Location: 66424-66922 bp Feature: domain Description: PRK1 0201 Location: 66424-66922 bp Feature: gene Location: 67051-69033 bp Feature: domain Description: PRK05658 Location: 67189-69031 bp Feature: domain Description: PRK05658 Location: 671 89-69031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: WRZS01000027.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B4682 NODE_27_length_53630_cov_154.232478, whole genome shotgun sequence (53630 bp)
Overview 1 RT 1: 4123-9048 bp Neighborhood of RT #1 [4123, 9056] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 4123-4845 bp Feature: domain Description: INT_P4_C Location: 4243-4774 bp Feature: domain Description: INT_P4_C Location: 42 43-4774 bp Feature: gene Location: 5170-6132 bp Feature: gene Location: 6132-7067 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6243-6828 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 62 43-682 8 bp Feature: gene Location: 7315-7524 bp Feature: gene Location: 7869-9056 bp Feature: domain Description: PRK10473 Location: 7872-9048 bp Feature: domain Description: PRK10473 Location: 7872 -9048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)