myRT

myRT report for GCA_013412115.1_ASM1341211v1

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Seq: WRZU01000023.1 Salmonella enterica subsp. enterica serovar Typhimurium strain C3378 NODE_23_length_81304_cov_78.282268, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 44575-48751 bp Neighborhood of RT #1 [44575, 48751] PRK10473 RVT-Retrons Feature: gene Location: 44575-45762 bp Feature: domain Description: PRK10473 Location: 44578-45754 bp Feature: domain Description: PRK1 0473 Location: 44578-45754 bp Feature: gene Location: 46107-46316 bp Feature: gene Location: 46564-47499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46675-47260 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46675-47260 bp Feature: gene Location: 47499-48461 bp Feature: gene Location: 48488-48751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: WRZU01000003.1 Salmonella enterica subsp. enterica serovar Typhimurium strain C3378 NODE_3_length_257426_cov_74.969561, whole genome shotgun sequence (257426 bp)
Overview 1 RT 1: 166225-173078 bp Neighborhood of RT #1 [166225, 173080] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 166225-166770 bp Feature: gene Location: 166773-168473 bp Feature: domain Description: 5 Location: 167997-168291 bp Feature: domain Description: 5 Location: 167997-1682 91 bp Feature: gene Location: 169380-170144 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 169503-169956 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 169503-169956 bp Feature: gene Location: 170468-170974 bp Feature: domain Description: PRK10201 Location: 170471-170969 bp Feature: domain Description: PRK102 01 Location: 170471-170969 bp Feature: gene Location: 171098-173080 bp Feature: domain Description: PRK05658 Location: 171236-173078 bp Feature: domain Description: PRK05658 Location: 1712 36-173078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)