myRT

myRT report for GCA_013412125.1_ASM1341212v1

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Seq: WRZV01000001.1 Salmonella enterica subsp. enterica serovar Typhimurium strain C2703 NODE_1_length_474163_cov_124.137966, whole genome shotgun sequence (474163 bp)
Overview 1 RT 1: 62090-68943 bp Neighborhood of RT #1 [62090, 68945] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 62090-62635 bp Feature: gene Location: 62638-64338 bp Feature: domain Description: 5 Location: 63862-64156 bp Feature: domain Description: 5 Location: 63862-641 56 bp Feature: gene Location: 65245-66009 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 65368-65821 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 65368-65821 bp Feature: gene Location: 66333-66839 bp Feature: domain Description: PRK10201 Location: 66336-66834 bp Feature: domain Description: PRK1 0201 Location: 66336-66834 bp Feature: gene Location: 66963-68945 bp Feature: domain Description: PRK05658 Location: 67101-68943 bp Feature: domain Description: PRK05658 Location: 671 01 -68943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: WRZV01000022.1 Salmonella enterica subsp. enterica serovar Typhimurium strain C2703 NODE_22_length_81335_cov_135.110630, whole genome shotgun sequence (81335 bp)
Overview 1 RT 1: 31797-36722 bp Neighborhood of RT #1 [31797, 36730] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31797-32519 bp Feature: domain Description: INT_P4_C Location: 31917-32448 bp Feature: domain Description: INT_P4_C Location: 31917-32 448 bp Feature: gene Location: 32844-33806 bp Feature: gene Location: 33806-34741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33917-34502 bp Feature: gene Location: 34989-35198 bp Feature: gene Location: 35543-36730 bp Feature: domain Description: PRK10473 Location: 35546-36722 bp Feature: domain Description: PRK10473 Location: 35546-3672 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)