myRT

myRT report for GCA_013412525.1_ASM1341252v1

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Seq: WSAQ01000040.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B2995 NODE_40_length_47598_cov_61.494668, whole genome shotgun sequence (47598 bp)
Overview 1 RT 1: 100-3016 bp Neighborhood of RT #1 [100, 3024] RVT-Retrons PRK10473 Feature: gene Location: 100-1035 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 211-796 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 1 -796 bp Feature: gene Location: 1283-1492 bp Feature: gene Location: 1837-3024 bp Feature: domain Description: PRK10473 Location: 1840-3016 bp Feature: domain Description: PRK1 0473 Location: 1 840-301 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: WSAQ01000009.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B2995 NODE_9_length_121568_cov_67.744406, whole genome shotgun sequence (121568 bp)
Overview 1 RT 1: 30323-37176 bp Neighborhood of RT #1 [30323, 37178] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 30323-30868 bp Feature: gene Location: 30871-32571 bp Feature: domain Description: 5 Location: 32095-32389 bp Feature: domain Description: 5 Location: 32 095-32 389 bp Feature: gene Location: 33478-34242 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 33601-34054 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 33601-34054 bp Feature: gene Location: 34566-35072 bp Feature: domain Description: PRK10201 Location: 34569-35067 bp Feature: domain Description: PRK102 01 Location: 34569-35067 bp Feature: gene Location: 35196-37178 bp Feature: domain Description: PRK05658 Location: 35334-37176 bp Feature: domain Description: PRK05658 Location: 35334-37176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)