myRT

myRT report for GCA_013412535.1_ASM1341253v1

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Seq: WSAP01000001.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B3014 NODE_1_length_495948_cov_63.940890, whole genome shotgun sequence (495948 bp)
Overview 1 RT 1: 62178-69031 bp Neighborhood of RT #1 [62178, 69033] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 62178-62723 bp Feature: gene Location: 62726-64426 bp Feature: domain Description: 5 Location: 63950-64244 bp Feature: domain Description: 5 Location: 63950-64244 bp Feature: gene Location: 65333-66097 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 65456-65909 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 65456-65909 bp Feature: gene Location: 66421-66927 bp Feature: domain Description: PRK10201 Location: 66424-66922 bp Feature: domain Description: PRK1 0201 Location: 66424-66922 bp Feature: gene Location: 67051-69033 bp Feature: domain Description: PRK05658 Location: 67189-69031 bp Feature: domain Description: PRK05658 Location: 671 89-69031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: WSAP01000026.1 Salmonella enterica subsp. enterica serovar Typhimurium strain B3014 NODE_26_length_81304_cov_69.661424, whole genome shotgun sequence (81304 bp)
Overview 1 RT 1: 44575-48751 bp Neighborhood of RT #1 [44575, 48751] PRK10473 RVT-Retrons Feature: gene Location: 44575-45762 bp Feature: domain Description: PRK10473 Location: 44578-45754 bp Feature: domain Description: PRK10473 Location: 44578-45754 bp Feature: gene Location: 46107-46316 bp Feature: gene Location: 46564-47499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46675-47260 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46675-472 60 bp Feature: gene Location: 47499-48461 bp Feature: gene Location: 48488-48751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons