myRT

myRT report for GCA_013413645.1_ASM1341364v1

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Seq: JACBWO010000016.1 Escherichia coli strain E7V4P1C10 Contig_16_consensus_sequence, whole genome shotgun sequence (116373 bp)
Overview 1 RT 1: 63356-66989 bp Neighborhood of RT #1 [63356, 67018] DUF932 RVT-GII Intron_maturas2 HNHc HTH_23 InsE TnpB_IS66 Feature: gene Location: 63356-63601 bp Feature: gene Location: 63601-63987 bp Feature: domain Description: DUF932 Location: 63607-63952 bp Feature: domain Description: DUF932 Location: 63607-63952 bp Feature: gene Location: 64160-65953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64436-65231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64436-65231 bp Feature: domain Description: Intron_maturas2 Location: 65357-65582 bp Feature: domain Description: Intron_maturas2 Location: 65357-65582 bp Feature: domain Description: HNHc Note: nucleases Location: 65777-65927 bp Feature: domain Description: HNHc Note: nucleases Location: 65777-65927 bp Feature: gene Location: 65994-66671 bp Feature: domain Description: HTH_23 Location: 66054-66165 bp Feature: domain Description: HTH_23 Location: 66054-661 65 bp Feature: domain Description: InsE Location: 66297-66651 bp Feature: domain Description: InsE Location: 66297-66651 bp Feature: gene Location: 66671-67018 bp Feature: domain Description: TnpB_IS66 Location: 66698-66989 bp Feature: domain Description: TnpB_IS66 Location: 66698-66989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_23 (pfam13384), InsE (COG2963), TnpB_IS66 (pfam05717)

Seq: JACBWO010000019.1 Escherichia coli strain E7V4P1C10 Contig_19_consensus_sequence, whole genome shotgun sequence (99027 bp)
Overview 1 RT 1: 35263-38636 bp Neighborhood of RT #1 [35263, 38636] HigB-like_toxin RVT-GII PinE Feature: gene Location: 35263-35559 bp Feature: domain Description: HigB-like_toxin Location: 35287-35557 bp Feature: domain Description: HigB-like_toxin Location: 352 87-35557 bp Feature: gene Location: 35480-35929 bp Feature: gene Location: 36041-36952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36245-36839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 45-36839 bp Feature: gene Location: 37787-38365 bp Feature: domain Description: PinE Location: 37805-38357 bp Feature: domain Description: PinE Location: 37805-38357 bp Feature: gene Location: 38427-38636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB-like_toxin (pfam05015), RVT-GII, PinE (COG1961)