myRT

myRT report for GCA_013413655.1_ASM1341365v1

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Seq: JACBWL010000016.1 Escherichia coli strain E7N6P4C8A Contig_16_consensus_sequence, whole genome shotgun sequence (143321 bp)
Overview 1 RT 1: 1576-5456 bp Neighborhood of RT #1 [1576, 5470] DUF1281 DUF1281_C RVT-GII GIIM HNHc PHA02517 InsE Feature: gene Location: 1576-2502 bp Feature: domain Description: DUF1281 Location: 1669-2197 bp Feature: domain Description: DUF1 281 Location: 1 669-21 97 bp Feature: domain Description: DUF1281_C Location: 2203-2443 bp Feature: domain Description: DUF1 281 _C Location: 2203-2443 bp Feature: gene Location: 2506-2811 bp Feature: gene Location: 3041-4222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3053-3500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3053-3500 bp Feature: domain Description: GIIM Note: maturase Location: 3551-3785 bp Feature: domain Description: GIIM Note: maturase Location: 3551 -3785 bp Feature: domain Description: HNHc Note: nucleases Location: 4016-4166 bp Feature: domain Description: HNHc Note: nucleases Location: 401 6-41 66 bp Feature: gene Location: 4314-5027 bp Feature: domain Description: PHA02517 Location: 4332-5016 bp Feature: domain Description: PHA0251 7 Location: 4332-501 6 bp Feature: gene Location: 5168-5470 bp Feature: domain Description: InsE Location: 5171-5456 bp Feature: domain Description: InsE Location: 51 71 -5456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JACBWL010000030.1 Escherichia coli strain E7N6P4C8A Contig_30_consensus_sequence, whole genome shotgun sequence (35312 bp)
Overview 1 RT 1: 1-1236 bp Neighborhood of RT #1 [1, 1236] HTH_Tnp_1 RVT_N RVT-GII Feature: gene Location: 1-225 bp Feature: domain Description: HTH_Tnp_1 Location: 10-223 bp Feature: domain Description: HTH_Tnp_1 Location: 10-2 2 3 bp Feature: gene Location: 287-763 bp Feature: RT Description: RVT_N Location: 341-584 bp Feature: RT Description: RVT_N Location: 341-584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629-761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 9-761 bp Feature: gene Location: 800-928 bp Feature: gene Location: 979-1236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT_N (pfam13655), RVT-GII