myRT

myRT report for GCA_013415245.1_ASM1341524v1

Download annotations/find similar RTs

Seq: JACBXX010000112.1 Streptococcus danieliae strain STR NODE_111_length_4198_cov_83.6106_ID_221, whole genome shotgun sequence (4198 bp)
Overview 1 RT 1: 3-1303 bp Neighborhood of RT #1 [3, 1305] RVT-GII RelE Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 822-1076 bp Feature: gene Location: 1093-1305 bp Feature: domain Description: RelE Location: 1096-1303 bp Feature: domain Description: RelE Location: 1 096-1 303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RelE (pfam06296)

Seq: JACBXX010000169.1 Streptococcus danieliae strain STR NODE_114_length_3980_cov_59.2245_ID_227, whole genome shotgun sequence (3980 bp)
Overview 1 RT 1: 3-1682 bp Neighborhood of RT #1 [3, 1687] RVT-GII PspC PRK04351 Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 07-366 bp Feature: gene Location: 920-1192 bp Feature: domain Description: PspC Location: 926-1112 bp Feature: domain Description: PspC Location: 92 6-1112 bp Feature: gene Location: 1262-1687 bp Feature: domain Description: PRK04351 Location: 1268-1682 bp Feature: domain Description: PRK04351 Location: 12 68-1682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PspC (pfam04024), PRK04351 (SprT family protein)

Seq: JACBXX010000151.1 Streptococcus danieliae strain STR NODE_116_length_3793_cov_90.4307_ID_231, whole genome shotgun sequence (3793 bp)
Overview 1 RT 1: 3-3161 bp Neighborhood of RT #1 [3, 3175] RVT-GII PRK13357 PfoR Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-3 66 bp Feature: gene Location: 1062-2099 bp Feature: domain Description: PRK13357 Location: 1077-2091 bp Feature: domain Description: PRK13 3 57 Location: 1077-2091 bp Feature: gene Location: 2117-3175 bp Feature: domain Description: PfoR Location: 2153-3161 bp Feature: domain Description: PfoR Location: 2153 -3 161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK13357 (branched-chain amino acid aminotransferase; Provisional), PfoR (COG3641)

Seq: JACBXX010000089.1 Streptococcus danieliae strain STR NODE_11_length_30929_cov_12.4453_ID_21, whole genome shotgun sequence (30929 bp)
Overview 1 RT 1: 26992-30925 bp Neighborhood of RT #1 [26992, 30927] ileS RVT-GII Feature: gene Location: 26992-29796 bp Feature: domain Description: ileS Location: 26995-29761 bp Feature: domain Description: ileS Location: 26995-29761 bp Feature: gene Location: 29940-30197 bp Feature: gene Location: 30562-30927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30766-30925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30766-30925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ileS (TIGR00392), RVT-GII

Seq: JACBXX010000177.1 Streptococcus danieliae strain STR NODE_120_length_3382_cov_70.89_ID_239, whole genome shotgun sequence (3382 bp)
Overview 1 RT 1: 279-3378 bp Neighborhood of RT #1 [279, 3380] PRK00142 Beta-lactamase2 RVT-GII Feature: gene Location: 279-1262 bp Feature: domain Description: PRK00142 Location: 288-1236 bp Feature: domain Description: PRK00142 Location: 288-1236 bp Feature: gene Location: 1369-2433 bp Feature: domain Description: Beta-lactamase2 Location: 1735-2308 bp Feature: domain Description: Beta-lactamase2 Location: 1735 -2308 bp Feature: gene Location: 3015-3380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3219-3378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3219-3378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00142 (rhodanese-related sulfurtransferase), Beta-lactamase2 (pfam13354), RVT-GII

Seq: JACBXX010000144.1 Streptococcus danieliae strain STR NODE_122_length_3303_cov_76.3508_ID_243, whole genome shotgun sequence (3303 bp)
Overview 1 RT 1: 75-3299 bp Neighborhood of RT #1 [75, 3301] CitB MFS_MefA_like RVT-GII Feature: gene Location: 75-689 bp Feature: domain Description: CitB Location: 141-639 bp Feature: domain Description: CitB Location: 141-6 39 bp Feature: gene Location: 962-2161 bp Feature: domain Description: MFS_MefA_like Location: 998-2123 bp Feature: domain Description: MFS_MefA_like Location: 998-2123 bp Feature: gene Location: 2936-3301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140-3299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3140-3299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CitB (TIGR02484), MFS_MefA_like (cd06173), RVT-GII

Seq: JACBXX010000178.1 Streptococcus danieliae strain STR NODE_123_length_3282_cov_86.2171_ID_245, whole genome shotgun sequence (3282 bp)
Overview 1 RT 1: 3-3278 bp Neighborhood of RT #1 [3, 3280] HTH_38 pyruv_oxi_spxB RVT-GII Feature: gene Location: 3-173 bp Feature: domain Description: HTH_38 Location: 27-156 bp Feature: domain Description: HTH_38 Location: 27 -156 bp Feature: gene Location: 579-2354 bp Feature: domain Description: pyruv_oxi_spxB Location: 597-2325 bp Feature: domain Description: pyruv_oxi_spxB Location: 597 -2325 bp Feature: gene Location: 2915-3280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3119-3278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3119-327 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), pyruv_oxi_spxB (TIGR02720), RVT-GII

Seq: JACBXX010000110.1 Streptococcus danieliae strain STR NODE_124_length_3271_cov_109.317_ID_247, whole genome shotgun sequence (3271 bp)
Overview 1 RT 1: 719-3267 bp Neighborhood of RT #1 [719, 3269] Rex RadC RVT-GII Feature: gene Location: 719-1366 bp Feature: domain Description: Rex Location: 734-1358 bp Feature: domain Description: Rex Location: 734-1358 bp Feature: gene Location: 1423-2124 bp Feature: domain Description: RadC Location: 1447-2110 bp Feature: domain Description: RadC Location: 1447-2110 bp Feature: gene Location: 2904-3269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108-3267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3108 -3267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rex (COG2344), RadC (pfam04002), RVT-GII

Seq: JACBXX010000182.1 Streptococcus danieliae strain STR NODE_125_length_3240_cov_106.276_ID_249, whole genome shotgun sequence (3240 bp)
Overview 1 RT 1: 1-3236 bp Neighborhood of RT #1 [1, 3238] GIIM GIIM BglG RVT-GII Feature: gene Location: 1-453 bp Feature: domain Description: GIIM Note: maturase Location: 49-262 bp Feature: domain Description: GIIM Note: maturase Location: 49 -262 bp Feature: domain Description: GIIM Note: maturase Location: 307-367 bp Feature: domain Description: GIIM Note: maturase Location: 307-367 bp Feature: gene Location: 651-2309 bp Feature: domain Description: BglG Location: 663-2148 bp Feature: domain Description: BglG Location: 663-2148 bp Feature: gene Location: 2873-3238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3077-3236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3077-3236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), BglG (COG3711), RVT-GII

Seq: JACBXX010000188.1 Streptococcus danieliae strain STR NODE_133_length_2631_cov_132.796_ID_265, whole genome shotgun sequence (2631 bp)
Overview 1 RT 1: 3-1308 bp Neighborhood of RT #1 [3, 1308] RVT-GII Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 822-1061 bp Feature: gene Location: 1123-1308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000242.1 Streptococcus danieliae strain STR NODE_150_length_1625_cov_148.105_ID_299, whole genome shotgun sequence (1625 bp)
Overview 1 RT 1: 1-1317 bp Neighborhood of RT #1 [1, 1334] RVT-GII GIIM DUF3397 Feature: gene Location: 1-921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-463 bp Feature: domain Description: GIIM Note: maturase Location: 517-730 bp Feature: domain Description: GIIM Note: maturase Location: 517-730 bp Feature: gene Location: 978-1334 bp Feature: domain Description: DUF3397 Location: 1026-1317 bp Feature: domain Description: DUF3397 Location: 1026-1317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3397 (pfam11877)

Seq: JACBXX010000111.1 Streptococcus danieliae strain STR NODE_153_length_1538_cov_183.731_ID_305, whole genome shotgun sequence (1538 bp)
Overview 1 RT 1: 3-1430 bp Neighborhood of RT #1 [3, 1462] RVT-GII COG3464 Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 816-947 bp Feature: gene Location: 1079-1462 bp Feature: domain Description: COG3464 Location: 1091-1430 bp Feature: domain Description: COG3464 Location: 1091-1430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3464 (Transposase )

Seq: JACBXX010000251.1 Streptococcus danieliae strain STR NODE_158_length_1452_cov_167.501_ID_315, whole genome shotgun sequence (1452 bp)
Overview 1 RT 1: 3-1303 bp Neighborhood of RT #1 [3, 1305] RVT-GII VOC_Bs_YwkD_like Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 733-909 bp Feature: gene Location: 919-1305 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 934-1303 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 934-13 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, VOC_Bs_YwkD_like (cd08352)

Seq: JACBXX010000236.1 Streptococcus danieliae strain STR NODE_160_length_1325_cov_204.837_ID_319, whole genome shotgun sequence (1325 bp)
Overview 1 RT 1: 12-1321 bp Neighborhood of RT #1 [12, 1323] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 12-404 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15-234 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15-234 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 252-375 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 252-375 bp Feature: gene Location: 958-1323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1162-1321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1162-1321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: JACBXX010000212.1 Streptococcus danieliae strain STR NODE_163_length_1259_cov_194.58_ID_325, whole genome shotgun sequence (1259 bp)
Overview 1 RT 1: 98-1255 bp Neighborhood of RT #1 [98, 1257] RVT-GII Feature: gene Location: 98-322 bp Feature: gene Location: 892-1257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096-1255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000191.1 Streptococcus danieliae strain STR NODE_168_length_1196_cov_220.93_ID_335, whole genome shotgun sequence (1196 bp)
Overview 1 RT 1: 3-1182 bp Neighborhood of RT #1 [3, 1193] RVT-GII Tra8 Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 816-947 bp Feature: gene Location: 1065-1193 bp Feature: domain Description: Tra8 Location: 1068-1182 bp Feature: domain Description: Tra8 Location: 1068-1182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tra8 (COG2826)

Seq: JACBXX010000067.1 Streptococcus danieliae strain STR NODE_16_length_24048_cov_22.8336_ID_31, whole genome shotgun sequence (24048 bp)
Overview 1 RT 1: 3-5235 bp 2 RT 2: 17884-23854 bp Neighborhood of RT #1 [3, 5285] RVT-GII YSIRK_signal GH20_DspB_LnbB-like Gram_pos_anchor RimL Neighborhood of RT #2 [17884, 24045] SSL2 Eco57I RVT-GII GIIM Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 971-4570 bp Feature: domain Description: YSIRK_signal Location: 986-1082 bp Feature: domain Description: YSIRK_signal Location: 986-1082 bp Feature: domain Description: GH20_DspB_LnbB-like Location: 1715-2783 bp Feature: domain Description: GH20_DspB_LnbB-like Location: 17 15-2783 bp Feature: domain Description: Gram_pos_anchor Location: 4475-4568 bp Feature: domain Description: Gram_pos_anchor Location: 4475-4568 bp Feature: gene Location: 4797-5285 bp Feature: domain Description: RimL Location: 5145-5235 bp Feature: domain Description: RimL Location: 5145-5235 bp Feature: gene Location: 17884-22302 bp Feature: domain Description: SSL2 Location: 18763-20053 bp Feature: domain Description: SSL2 Location: 18763-20053 bp Feature: domain Description: Eco57I Location: 21235-21532 bp Feature: domain Description: Eco57I Location: 21235-21532 bp Feature: gene Location: 22305-22979 bp Feature: gene Location: 23128-24045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23140-23587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23140-23587 bp Feature: domain Description: GIIM Note: maturase Location: 23641-23854 bp Feature: domain Description: GIIM Note: maturase Location: 23641-23854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YSIRK_signal (TIGR01168), GH20_DspB_LnbB-like (cd06564), Gram_pos_anchor (pfam00746), RimL (COG1670), SSL2 (COG1061), Eco57I (pfam07669), GIIM (pfam08388)

Seq: JACBXX010000031.1 Streptococcus danieliae strain STR NODE_174_length_1157_cov_215.743_ID_347, whole genome shotgun sequence (1157 bp)
Overview 1 RT 1: 790-1156 bp Neighborhood of RT #1 [790, 1155] RVT-GII Feature: gene Location: 790-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-1156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000220.1 Streptococcus danieliae strain STR NODE_175_length_1113_cov_219.697_ID_349, whole genome shotgun sequence (1113 bp)
Overview 1 RT 1: 1-730 bp Neighborhood of RT #1 [1, 921] RVT-GII GIIM Feature: gene Location: 1-921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-463 bp Feature: domain Description: GIIM Note: maturase Location: 517-730 bp Feature: domain Description: GIIM Note: maturase Location: 517-730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACBXX010000225.1 Streptococcus danieliae strain STR NODE_180_length_1063_cov_236.121_ID_359, whole genome shotgun sequence (1063 bp)
Overview 1 RT 1: 3-1014 bp Neighborhood of RT #1 [3, 1014] RVT-GII Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20 7-366 bp Feature: gene Location: 733-1014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000051.1 Streptococcus danieliae strain STR NODE_182_length_1015_cov_247.154_ID_363, whole genome shotgun sequence (1015 bp)
Overview 1 RT 1: 3-366 bp Neighborhood of RT #1 [3, 368] RVT-GII Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000147.1 Streptococcus danieliae strain STR NODE_193_length_879_cov_242.773_ID_385, whole genome shotgun sequence (879 bp)
Overview 1 RT 1: 512-875 bp Neighborhood of RT #1 [512, 877] RVT-GII Feature: gene Location: 512-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716-875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716-875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000227.1 Streptococcus danieliae strain STR NODE_20_length_22675_cov_15.4058_ID_39, whole genome shotgun sequence (22675 bp)
Overview 1 RT 1: 3-2509 bp Neighborhood of RT #1 [3, 2514] RVT-GII araD PRK13210 Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210-366 bp Feature: gene Location: 944-1654 bp Feature: domain Description: araD Location: 950-1643 bp Feature: domain Description: araD Location: 950-1643 bp Feature: gene Location: 1654-2514 bp Feature: domain Description: PRK13210 Location: 1660-2509 bp Feature: domain Description: PRK13210 Location: 1660-2509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, araD (TIGR00760), PRK13210 (L-ribulose-5-phosphate 3-epimerase)

Seq: JACBXX010000256.1 Streptococcus danieliae strain STR NODE_220_length_392_cov_182.4_ID_439, whole genome shotgun sequence (392 bp)
Overview 1 RT 1: 43-388 bp Neighborhood of RT #1 [43, 390] RVT-GII Feature: gene Location: 43-390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000258.1 Streptococcus danieliae strain STR NODE_221_length_379_cov_317.373_ID_441, whole genome shotgun sequence (379 bp)
Overview 1 RT 1: 2-245 bp Neighborhood of RT #1 [2, 376] RVT-GII Feature: gene Location: 2-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000106.1 Streptococcus danieliae strain STR NODE_23_length_20849_cov_16.6734_ID_45, whole genome shotgun sequence (20849 bp)
Overview 1 RT 1: 17163-20845 bp Neighborhood of RT #1 [17163, 20847] glgD glgA RVT-GII Feature: gene Location: 17163-18302 bp Feature: domain Description: glgD Location: 17175-18279 bp Feature: domain Description: glgD Location: 17175-18279 bp Feature: gene Location: 18299-19726 bp Feature: domain Description: glgA Location: 18302-19718 bp Feature: domain Description: glgA Location: 18302-19718 bp Feature: gene Location: 20482-20847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20686-20845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20686-20845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glgD (TIGR02092), glgA (TIGR02095), RVT-GII

Seq: JACBXX010000246.1 Streptococcus danieliae strain STR NODE_253_length_250_cov_10.2683_ID_505, whole genome shotgun sequence (250 bp)
Overview 1 RT 1: 1-247 bp Neighborhood of RT #1 [1, 249] RVT-CRISPR-like group_II_RT_mat Feature: gene Location: 1-249 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4-124 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4-124 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 127-247 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 127 -247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, group_II_RT_mat (TIGR04416)

Seq: JACBXX010000002.1 Streptococcus danieliae strain STR NODE_260_length_243_cov_366.345_ID_519, whole genome shotgun sequence (243 bp)
Overview 1 RT 1: 3-240 bp Neighborhood of RT #1 [3, 242] RVT-GII Feature: gene Location: 3-242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000164.1 Streptococcus danieliae strain STR NODE_29_length_19263_cov_16.4412_ID_57, whole genome shotgun sequence (19263 bp)
Overview 1 RT 1: 16931-19259 bp Neighborhood of RT #1 [16931, 19261] upp clpP RVT-GII Feature: gene Location: 16931-17671 bp Feature: domain Description: upp Location: 17048-17669 bp Feature: domain Description: upp Location: 17048-17669 bp Feature: gene Location: 17744-18340 bp Feature: domain Description: clpP Location: 17747-18326 bp Feature: domain Description: clpP Location: 17747-18326 bp Feature: gene Location: 18896-19261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19100-19259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19100-19259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT upp (TIGR01091), clpP, RVT-GII

Seq: JACBXX010000159.1 Streptococcus danieliae strain STR NODE_43_length_15801_cov_18.2546_ID_85, whole genome shotgun sequence (15801 bp)
Overview 1 RT 1: 3-2665 bp Neighborhood of RT #1 [3, 2673] RVT-GII PIN_NicB-like YitT Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 927-1595 bp Feature: domain Description: PIN_NicB-like Location: 933-1518 bp Feature: domain Description: PIN_NicB-like Location: 933-1518 bp Feature: gene Location: 1738-2673 bp Feature: domain Description: YitT Location: 1822-2665 bp Feature: domain Description: YitT Location: 1822-2665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PIN_NicB-like (cd18722), YitT (COG1284)

Seq: JACBXX010000137.1 Streptococcus danieliae strain STR NODE_46_length_15021_cov_19.8688_ID_91, whole genome shotgun sequence (15021 bp)
Overview 1 RT 1: 3-2101 bp Neighborhood of RT #1 [3, 2109] RVT-GII GMP_reduct_2 Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 816-947 bp Feature: gene Location: 1126-2109 bp Feature: domain Description: GMP_reduct_2 Location: 1147-2101 bp Feature: domain Description: GMP_reduct_2 Location: 1147-2101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GMP_reduct_2 (TIGR01306)

Seq: JACBXX010000166.1 Streptococcus danieliae strain STR NODE_55_length_12919_cov_38.3873_ID_109, whole genome shotgun sequence (12919 bp)
Overview 1 RT 1: 3-4383 bp 2 RT 2: 10952-12725 bp Neighborhood of RT #1 [3, 4394] RVT-GII arb arb PTS-II-ABC-beta Neighborhood of RT #2 [10952, 12916] Ion_trans_2 AdaB RVT-GII GIIM Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 975-2456 bp Feature: domain Description: arb Location: 984-1095 bp Feature: domain Description: arb Location: 984-1095 bp Feature: domain Description: arb Location: 1203-2451 bp Feature: domain Description: arb Location: 1203-2451 bp Feature: gene Location: 2496-4394 bp Feature: domain Description: PTS-II-ABC-beta Location: 2511-4383 bp Feature: domain Description: PTS-II-ABC-beta Location: 2511-4383 bp Feature: gene Location: 10952-11278 bp Feature: domain Description: Ion_trans_2 Location: 11033-11243 bp Feature: domain Description: Ion_trans_2 Location: 11033-11243 bp Feature: gene Location: 11419-11922 bp Feature: domain Description: AdaB Location: 11425-11908 bp Feature: domain Description: AdaB Location: 11425-11908 bp Feature: gene Location: 11999-12916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12011-12458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12011-12458 bp Feature: domain Description: GIIM Note: maturase Location: 12512-12725 bp Feature: domain Description: GIIM Note: maturase Location: 12512-12725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, arb (PRK09593), PTS-II-ABC-beta (TIGR01995), Ion_trans_2 (pfam07885), AdaB (COG0350), GIIM (pfam08388)

Seq: JACBXX010000117.1 Streptococcus danieliae strain STR NODE_62_length_11511_cov_33.2093_ID_123, whole genome shotgun sequence (11511 bp)
Overview 1 RT 1: 3-2488 bp Neighborhood of RT #1 [3, 2580] RVT-GII PelG Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 816-947 bp Feature: gene Location: 1132-2580 bp Feature: domain Description: PelG Location: 1135-2488 bp Feature: domain Description: PelG Location: 1135-2488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PelG (pfam16933)

Seq: JACBXX010000054.1 Streptococcus danieliae strain STR NODE_64_length_11316_cov_23.3397_ID_127, whole genome shotgun sequence (11316 bp)
Overview 1 RT 1: 9961-11310 bp Neighborhood of RT #1 [9961, 11315] RVT-GII Feature: gene Location: 9961-10203 bp Feature: gene Location: 10397-10582 bp Feature: gene Location: 10947-11315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11151-11310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11151-11310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000042.1 Streptococcus danieliae strain STR NODE_73_length_10092_cov_28.5238_ID_145, whole genome shotgun sequence (10092 bp)
Overview 1 RT 1: 8906-10088 bp Neighborhood of RT #1 [8906, 10090] RVT-GII Feature: gene Location: 8906-9058 bp Feature: gene Location: 9091-9360 bp Feature: gene Location: 9725-10090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9929-10088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9929-10088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACBXX010000174.1 Streptococcus danieliae strain STR NODE_77_length_9692_cov_28.4236_ID_153, whole genome shotgun sequence (9692 bp)
Overview 1 RT 1: 3-2500 bp Neighborhood of RT #1 [3, 2502] RVT-GII pgi Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-36 6 bp Feature: gene Location: 816-947 bp Feature: gene Location: 1135-2502 bp Feature: domain Description: pgi Location: 1156-2500 bp Feature: domain Description: pgi Location: 1156-2500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pgi (PRK14097)

Seq: JACBXX010000038.1 Streptococcus danieliae strain STR NODE_78_length_9080_cov_29.6216_ID_155, whole genome shotgun sequence (9080 bp)
Overview 1 RT 1: 6925-9076 bp Neighborhood of RT #1 [6925, 9078] DDE_Tnp_4 HTH_Tnp_4 RVT-GII Feature: gene Location: 6925-7233 bp Feature: domain Description: DDE_Tnp_4 Location: 6961-7165 bp Feature: domain Description: DDE_Tnp_4 Location: 6961-7165 bp Feature: gene Location: 7338-7724 bp Feature: domain Description: HTH_Tnp_4 Location: 7482-7629 bp Feature: domain Description: HTH_Tnp_4 Location: 7482-7629 bp Feature: gene Location: 8713-9078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8917-9076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8917-9076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_4 (pfam13359), HTH_Tnp_4 (pfam13613), RVT-GII

Seq: JACBXX010000168.1 Streptococcus danieliae strain STR NODE_83_length_8486_cov_30.587_ID_165, whole genome shotgun sequence (8486 bp)
Overview 1 RT 1: 5860-8482 bp Neighborhood of RT #1 [5860, 8484] SrmB Methyltransf_23 RVT-GII Feature: gene Location: 5860-6945 bp Feature: domain Description: SrmB Location: 5878-6898 bp Feature: domain Description: SrmB Location: 5878-6898 bp Feature: gene Location: 6956-7570 bp Feature: domain Description: Methyltransf_23 Location: 7040-7484 bp Feature: domain Description: Methyltransf_23 Location: 7040-7484 bp Feature: gene Location: 8119-8484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8323-8482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8323-8482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SrmB (COG0513), Methyltransf_23 (pfam13489), RVT-GII

Seq: JACBXX010000119.1 Streptococcus danieliae strain STR NODE_84_length_8392_cov_31.7499_ID_167, whole genome shotgun sequence (8392 bp)
Overview 1 RT 1: 6513-8388 bp Neighborhood of RT #1 [6513, 8390] Dtd RHOD RVT-GII Feature: gene Location: 6513-6956 bp Feature: domain Description: Dtd Location: 6516-6945 bp Feature: domain Description: Dtd Location: 6516-6945 bp Feature: gene Location: 6966-7244 bp Feature: domain Description: RHOD Location: 6990-7230 bp Feature: domain Description: RHOD Location: 6990-7230 bp Feature: gene Location: 8025-8390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8229-8388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8229-8388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dtd (COG1490), RHOD (smart00450), RVT-GII

Seq: JACBXX010000207.1 Streptococcus danieliae strain STR NODE_88_length_7688_cov_33.806_ID_175, whole genome shotgun sequence (7688 bp)
Overview 1 RT 1: 5399-7684 bp Neighborhood of RT #1 [5399, 7686] Rfe RVT-GII Feature: gene Location: 5399-6556 bp Feature: domain Description: Rfe Location: 5420-6380 bp Feature: domain Description: Rfe Location: 5420-6380 bp Feature: gene Location: 6628-6867 bp Feature: gene Location: 7321-7686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7525-7684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7525-7684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rfe (COG0472), RVT-GII

Seq: JACBXX010000055.1 Streptococcus danieliae strain STR NODE_96_length_6504_cov_38.2315_ID_191, whole genome shotgun sequence (6504 bp)
Overview 1 RT 1: 2997-6500 bp Neighborhood of RT #1 [2997, 6502] PhoH PRK06707 RVT-GII Feature: gene Location: 2997-3974 bp Feature: domain Description: PhoH Location: 3003-3963 bp Feature: domain Description: PhoH Location: 3003-3963 bp Feature: gene Location: 4050-5573 bp Feature: domain Description: PRK06707 Location: 4080-5553 bp Feature: domain Description: PRK06707 Location: 4080-5553 bp Feature: gene Location: 6137-6502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6341-6500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6341 -6500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhoH (pfam02562), PRK06707 (amidase; Provisional), RVT-GII

Seq: JACBXX010000076.1 Streptococcus danieliae strain STR NODE_98_length_6474_cov_71.2995_ID_195, whole genome shotgun sequence (6474 bp)
Overview 1 RT 1: 3-1706 bp 2 RT 2: 3785-6280 bp Neighborhood of RT #1 [3, 1732] RVT-GII COG4478 Neighborhood of RT #2 [3785, 6471] PBP2_GltS PBP2_GltS RVT-GII GIIM Feature: gene Location: 3-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-366 bp Feature: gene Location: 822-1061 bp Feature: gene Location: 1118-1732 bp Feature: domain Description: COG4478 Location: 1154-1706 bp Feature: domain Description: COG4478 Location: 1154-1706 bp Feature: gene Location: 3785-4591 bp Feature: domain Description: PBP2_GltS Location: 3893-4568 bp Feature: domain Description: PBP2_GltS Location: 3893-4568 bp Feature: gene Location: 4601-5404 bp Feature: domain Description: PBP2_GltS Location: 4706-5381 bp Feature: domain Description: PBP2_GltS Location: 4706-5381 bp Feature: gene Location: 5554-6471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5566-6013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5566-6013 bp Feature: domain Description: GIIM Note: maturase Location: 6067-6280 bp Feature: domain Description: GIIM Note: maturase Location: 6067-6280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG4478 (Uncharacterized membrane protein ), PBP2_GltS (cd13620), GIIM (pfam08388)