myRT

myRT report for GCA_013415545.1_ASM1341554v1

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Seq: JAAEYO010000198.1 Pseudomonas syringae pv. actinidiae strain MAFF 212057 Psa5-212057_contig_198, whole genome shotgun sequence (4384 bp)
Overview 1 RT 1: 2-2413 bp Neighborhood of RT #1 [2, 2469] RVT-G2L4 LysR_substrate Feature: gene Location: 2-1000 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 221-806 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 221 -806 bp Feature: gene Location: 1062-1256 bp Feature: gene Location: 1921-2469 bp Feature: domain Description: LysR_substrate Location: 1957-2413 bp Feature: domain Description: LysR_substrate Location: 1 957-241 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L4, LysR_substrate (pfam03466)

Seq: JAAEYO010000485.1 Pseudomonas syringae pv. actinidiae strain MAFF 212057 Psa5-212057_contig_485, whole genome shotgun sequence (987 bp)
Overview 1 RT 1: 96-987 bp Neighborhood of RT #1 [96, 986] RVT-GII Feature: gene Location: 96-383 bp Feature: gene Location: 609-986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 849-987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 849-987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAEYO010000076.1 Pseudomonas syringae pv. actinidiae strain MAFF 212057 Psa5-212057_contig_76, whole genome shotgun sequence (1856 bp)
Overview 1 RT 1: 359-1592 bp Neighborhood of RT #1 [359, 1726] RVT-GII GIIM Feature: gene Location: 359-1726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-13 07 bp Feature: domain Description: GIIM Note: maturase Location: 1364-1592 bp Feature: domain Description: GIIM Note: maturase Location: 13 64-1592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAEYO010000077.1 Pseudomonas syringae pv. actinidiae strain MAFF 212057 Psa5-212057_contig_77, whole genome shotgun sequence (16853 bp)
Overview 1 RT 1: 2-1839 bp Neighborhood of RT #1 [2, 1856] RVT-GII GIIM RcnB TrpA Feature: gene Location: 2-778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-350 bp Feature: domain Description: GIIM Note: maturase Location: 395-605 bp Feature: domain Description: GIIM Note: maturase Location: 395-605 bp Feature: gene Location: 927-1445 bp Feature: domain Description: RcnB Location: 1284-1419 bp Feature: domain Description: RcnB Location: 1284 -14 19 bp Feature: gene Location: 1572-1856 bp Feature: domain Description: TrpA Location: 1578-1839 bp Feature: domain Description: TrpA Location: 1578-1839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RcnB (pfam11776), TrpA (COG0159)