myRT

myRT report for GCA_013416335.1_ASM1341633v1

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Seq: JACCEW010000001.1 Pusillimonas soli strain DSM 25264 NODE_1_length_1241410_cov_75.079315, whole genome shotgun sequence (1241410 bp)
Overview 1 RT 1: 575652-581303 bp 2 RT 2: 1190956-1198525 bp Neighborhood of RT #1 [575652, 581401] HTH_31 HipA HipA_C RVT-UG5 nitrilase HEPN_AbiU2 Neighborhood of RT #2 [1190956, 1198525] TraI_TIGR TraI_TIGR TraI_TIGR TraI_TIGR RVT-Retrons AAA_21 Feature: gene Location: 575652-576017 bp Feature: domain Description: HTH_31 Location: 575706-575880 bp Feature: domain Description: HTH_31 Location: 575706-575880 bp Feature: gene Location: 576014-577258 bp Feature: domain Description: HipA Location: 576098-576197 bp Feature: domain Description: HipA Location: 576098-5761 97 bp Feature: domain Description: HipA_C Location: 576548-577172 bp Feature: domain Description: HipA_C Location: 576548-5771 72 bp Feature: gene Location: 577567-579522 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 578038-578518 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 578038-57851 8 bp Feature: gene Location: 579522-580454 bp Feature: domain Description: nitrilase Location: 579717-580359 bp Feature: domain Description: nitrilase Location: 57971 7-580359 bp Feature: gene Location: 580811-581401 bp Feature: domain Description: HEPN_AbiU2 Location: 580862-581303 bp Feature: domain Description: HEPN_AbiU2 Location: 580862-581 303 bp Feature: gene Location: 1190956-1193853 bp Feature: domain Description: TraI_TIGR Location: 1190959-1192087 bp Feature: domain Description: TraI_TIGR Location: 1 1 90959-1 1 92087 bp Feature: domain Description: TraI_TIGR Location: 1192246-1192924 bp Feature: domain Description: TraI_TIGR Location: 1 1 92246-1 1 92924 bp Feature: domain Description: TraI_TIGR Location: 1192969-1193533 bp Feature: domain Description: TraI_TIGR Location: 1 1 92969-1 1 93533 bp Feature: domain Description: TraI_TIGR Location: 1193542-1193716 bp Feature: domain Description: TraI_TIGR Location: 1 1 93542-1 1 9371 6 bp Feature: gene Location: 1194180-1194377 bp Feature: gene Location: 1194710-1195711 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1194827-1195385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 94827-1 1 95385 bp Feature: gene Location: 1195825-1197267 bp Feature: domain Description: AAA_21 Location: 1196050-1196452 bp Feature: domain Description: AAA_21 Location: 1 1 96050-1 1 96452 bp Feature: gene Location: 1198208-1198525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_31 (pfam13560), HipA (COG3550), HipA_C (pfam07804), RVT-UG5, nitrilase (cl11424), HEPN_AbiU2 (pfam18734), TraI_TIGR (TIGR02760), RVT-Retrons, AAA_21 (pfam13304)

Seq: JACCEW010000008.1 Pusillimonas soli strain DSM 25264 NODE_8_length_95432_cov_73.912575, whole genome shotgun sequence (95432 bp)
Overview 1 RT 1: 43629-47577 bp Neighborhood of RT #1 [43629, 47577] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 43629-44657 bp Feature: domain Description: DUF1566 Location: 44388-44634 bp Feature: domain Description: DUF1566 Location: 44388-44634 bp Feature: gene Location: 44685-45074 bp Feature: domain Description: Avd_like Location: 44712-45018 bp Feature: domain Description: Avd_like Location: 44712 -45018 bp Feature: gene Location: 45329-46450 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45515-46202 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45515-462 02 bp Feature: gene Location: 46499-46996 bp Feature: gene Location: 47047-47577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs