myRT

myRT report for GCA_013416405.1_ASM1341640v1

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Seq: JACCET010000028.1 Alcaligenaceae bacterium strain CAII-52 NODE_28_length_2326_cov_577.668486, whole genome shotgun sequence (2326 bp)
Overview 1 RT 1: 673-1957 bp Neighborhood of RT #1 [673, 2205] RVT-GII GIIM Feature: gene Location: 673-2205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1 684 bp Feature: domain Description: GIIM Note: maturase Location: 1780-1957 bp Feature: domain Description: GIIM Note: maturase Location: 1 780-1 957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACCET010000005.1 Alcaligenaceae bacterium strain CAII-52 NODE_5_length_329364_cov_86.614539, whole genome shotgun sequence (329364 bp)
Overview 1 RT 1: 187072-192416 bp Neighborhood of RT #1 [187072, 192556] CaiB PRK11233 RVT-GII GIIM PHA02517 PRK09692 Feature: gene Location: 187072-188310 bp Feature: domain Description: CaiB Location: 187078-188260 bp Feature: domain Description: CaiB Location: 187078-1882 60 bp Feature: gene Location: 188415-189347 bp Feature: domain Description: PRK11233 Location: 188418-189306 bp Feature: domain Description: PRK112 33 Location: 188418-189306 bp Feature: gene Location: 189755-191287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190028-190766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19002 8-190766 bp Feature: domain Description: GIIM Note: maturase Location: 190895-191063 bp Feature: domain Description: GIIM Note: maturase Location: 190895-191063 bp Feature: gene Location: 191413-191865 bp Feature: domain Description: PHA02517 Location: 191416-191845 bp Feature: domain Description: PHA02 517 Location: 191416-191845 bp Feature: gene Location: 191867-192556 bp Feature: domain Description: PRK09692 Location: 191897-192416 bp Feature: domain Description: PRK09692 Location: 191897-192 416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CaiB (COG1804), PRK11233 (nitrogen assimilation transcriptional regulator; Provisional), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK09692 (Integrase; provisional)