myRT

myRT report for GCA_013416455.1_ASM1341645v1

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Seq: JACCES010000021.1 Alcaligenaceae bacterium strain CAII-56 NODE_21_length_63980_cov_61.224672, whole genome shotgun sequence (63980 bp)
Overview 1 RT 1: 58442-62891 bp Neighborhood of RT #1 [58442, 62891] Dcm Dcm RVT-DGRs Avd_like Feature: gene Location: 58442-58687 bp Feature: gene Location: 58744-60684 bp Feature: domain Description: Dcm Location: 58759-59467 bp Feature: domain Description: Dcm Location: 58759-59467 bp Feature: domain Description: Dcm Location: 60388-60565 bp Feature: domain Description: Dcm Location: 60388-60565 bp Feature: gene Location: 60681-61790 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 60873-61551 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 60873-61 551 bp Feature: gene Location: 62047-62436 bp Feature: domain Description: Avd_like Location: 62074-62380 bp Feature: domain Description: Avd_like Location: 62074-62380 bp Feature: gene Location: 62475-62891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376)

Seq: JACCES010000006.1 Alcaligenaceae bacterium strain CAII-56 NODE_6_length_356073_cov_60.781399, whole genome shotgun sequence (356073 bp)
Overview 1 RT 1: 346864-354704 bp Neighborhood of RT #1 [346864, 354913] AbiEi_3_N AbiEi_3 AbiEii RVT-UG1 HTH_XRE ImmA Feature: gene Location: 346864-347652 bp Feature: domain Description: AbiEi_3_N Location: 346876-347122 bp Feature: domain Description: AbiEi_3_N Location: 346876-34712 2 bp Feature: domain Description: AbiEi_3 Location: 347134-347626 bp Feature: domain Description: AbiEi_3 Location: 347134-34762 6 bp Feature: gene Location: 347636-348583 bp Feature: domain Description: AbiEii Location: 347687-348311 bp Feature: domain Description: AbiEii Location: 347687-348311 bp Feature: gene Location: 348786-352757 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 349521-350028 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 34952 1-35002 8 bp Feature: gene Location: 353064-353711 bp Feature: gene Location: 353708-354913 bp Feature: domain Description: HTH_XRE Location: 353744-353912 bp Feature: domain Description: HTH_XRE Location: 353744-353912 bp Feature: domain Description: ImmA Location: 354125-354704 bp Feature: domain Description: ImmA Location: 35412 5-354704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843), RVT-UG1, HTH_XRE (smart00530), ImmA (COG2856)

Seq: JACCES010000007.1 Alcaligenaceae bacterium strain CAII-56 NODE_7_length_235091_cov_50.793377, whole genome shotgun sequence (235091 bp)
Overview 1 RT 1: 185268-194778 bp Neighborhood of RT #1 [185268, 194900] SRAP TraI_TIGR TraI_TIGR RVT-UG8 TrwB SPEC Feature: gene Location: 185268-186152 bp Feature: domain Description: SRAP Location: 185481-186126 bp Feature: domain Description: SRAP Location: 185481-186126 bp Feature: gene Location: 186493-189390 bp Feature: domain Description: TraI_TIGR Location: 186496-187633 bp Feature: domain Description: TraI_TIGR Location: 186496-18763 3 bp Feature: domain Description: TraI_TIGR Location: 187777-189259 bp Feature: domain Description: TraI_TIGR Location: 187777-189259 bp Feature: gene Location: 190782-192686 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 191289-191733 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 191289-19173 3 bp Feature: gene Location: 192796-194454 bp Feature: domain Description: TrwB Location: 193072-194341 bp Feature: domain Description: TrwB Location: 193 072-1943 41 bp Feature: gene Location: 194466-194900 bp Feature: domain Description: SPEC Location: 194532-194778 bp Feature: domain Description: SPEC Location: 19453 2-194778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), TraI_TIGR (TIGR02760), RVT-UG8, TrwB, SPEC (smart00150)