myRT

myRT report for GCA_013416545.1_ASM1341654v1

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Seq: JACCEU010000017.1 Eoetvoesia caeni strain PB3-7B NODE_17_length_32428_cov_42.040463, whole genome shotgun sequence (32428 bp)
Overview 1 RT 1: 153-2691 bp Neighborhood of RT #1 [153, 2691] PHA02517 RVT-GII GIIM Feature: gene Location: 153-614 bp Feature: domain Description: PHA02517 Location: 156-594 bp Feature: domain Description: PHA0251 7 Location: 1 56-594 bp Feature: gene Location: 731-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809-1 247 bp Feature: domain Description: GIIM Note: maturase Location: 1373-1544 bp Feature: domain Description: GIIM Note: maturase Location: 1 373-1 544 bp Feature: gene Location: 1988-2263 bp Feature: gene Location: 2266-2691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JACCEU010000003.1 Eoetvoesia caeni strain PB3-7B NODE_3_length_643668_cov_40.936828, whole genome shotgun sequence (643668 bp)
Overview 1 RT 1: 639358-643666 bp Neighborhood of RT #1 [639358, 643666] AlpA PHA02517 RVT-GII GIIM Feature: gene Location: 639358-639651 bp Feature: domain Description: AlpA Location: 639454-639634 bp Feature: domain Description: AlpA Location: 639454-639634 bp Feature: gene Location: 640689-641156 bp Feature: domain Description: PHA02517 Location: 640692-641124 bp Feature: domain Description: PHA02 517 Location: 640692 -64112 4 bp Feature: gene Location: 641273-642805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 641546-642284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 641546-642 2 84 bp Feature: domain Description: GIIM Note: maturase Location: 642413-642581 bp Feature: domain Description: GIIM Note: maturase Location: 642 413-642 581 bp Feature: gene Location: 643370-643666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)