myRT

myRT report for GCA_013416935.1_ASM1341693v1

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Seq: VPEY01000001.1 Acinetobacter sp. YH1901141 NODE_1_length_326714_cov_94.657182, whole genome shotgun sequence (326714 bp)
Overview 1 RT 1: 101470-106225 bp Neighborhood of RT #1 [101470, 106225] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 101470-102129 bp Feature: domain Description: TIGR02646 Location: 101560-101953 bp Feature: domain Description: TIGR02646 Location: 1 01 560-1 01 953 bp Feature: gene Location: 102126-103694 bp Feature: domain Description: COG3950 Location: 102294-103638 bp Feature: domain Description: COG3950 Location: 1 02294-1 03638 bp Feature: gene Location: 103696-104643 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103816-104410 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0381 6-1 0441 0 bp Feature: gene Location: 104961-105350 bp Feature: gene Location: 105710-106225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: VPEY01000032.1 Acinetobacter sp. YH1901141 NODE_32_length_19897_cov_76.676429, whole genome shotgun sequence (19897 bp)
Overview 1 RT 1: 11590-13996 bp Neighborhood of RT #1 [11590, 14016] HMA HMA RVT_N RVT-GII DDE_Tnp_IS66 Feature: gene Location: 11590-11784 bp Feature: domain Description: HMA Location: 11599-11767 bp Feature: domain Description: HMA Location: 11599-11767 bp Feature: gene Location: 11961-12206 bp Feature: domain Description: HMA Location: 12003-12183 bp Feature: domain Description: HMA Location: 12 003-12 183 bp Feature: gene Location: 12263-12775 bp Feature: RT Description: RVT_N Location: 12323-12566 bp Feature: RT Description: RVT_N Location: 12 32 3-12 566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12611-12746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 611-12 746 bp Feature: gene Location: 12803-12982 bp Feature: gene Location: 13315-14016 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13333-13996 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13333-13996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), RVT_N (pfam13655), RVT-GII, DDE_Tnp_IS66 (pfam03050)